This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5vw2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:00, 4 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5vw2' size='340' side='right'caption='[[5vw2]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
<StructureSection load='5vw2' size='340' side='right'caption='[[5vw2]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5vw2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Maize Maize]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VW2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VW2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5vw2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VW2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VW2 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FDA:DIHYDROFLAVINE-ADENINE+DINUCLEOTIDE'>FDA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.451&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5vw3|5vw3]], [[5vw4|5vw4]], [[5vw5|5vw5]], [[5vw6|5vw6]], [[5vw8|5vw8]], [[5vw7|5vw7]], [[5vwb|5vwb]], [[5vw9|5vw9]], [[5vwa|5vwa]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FDA:DIHYDROFLAVINE-ADENINE+DINUCLEOTIDE'>FDA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vw2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vw2 OCA], [https://pdbe.org/5vw2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vw2 RCSB], [https://www.ebi.ac.uk/pdbsum/5vw2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vw2 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vw2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vw2 OCA], [http://pdbe.org/5vw2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vw2 RCSB], [http://www.ebi.ac.uk/pdbsum/5vw2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vw2 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/B4G043_MAIZE B4G043_MAIZE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Maize]]
+
[[Category: Zea mays]]
-
[[Category: Carpenter, R A]]
+
[[Category: Carpenter RA]]
-
[[Category: Hall, A R]]
+
[[Category: Hall AR]]
-
[[Category: Karplus, P A]]
+
[[Category: Karplus PA]]
-
[[Category: Kean, K M]]
+
[[Category: Kean KM]]
-
[[Category: Active site compression]]
+
-
[[Category: Flavoenzyme]]
+
-
[[Category: Hydride transfer]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Photosynthesis]]
+
-
[[Category: Transferase]]
+

Current revision

NADPH soak of Y316S mutant of corn root ferredoxin:NADP+ reductase

PDB ID 5vw2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools