5wkq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:15, 4 October 2023) (edit) (undo)
 
Line 1: Line 1:
==2.10 A resolution structure of IpaB (residues 74-242) from Shigella flexneri==
==2.10 A resolution structure of IpaB (residues 74-242) from Shigella flexneri==
-
<StructureSection load='5wkq' size='340' side='right' caption='[[5wkq]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='5wkq' size='340' side='right'caption='[[5wkq]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5wkq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"shigella_paradysenteriae"_weldin_1927 "shigella paradysenteriae" weldin 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WKQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5WKQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5wkq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WKQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5WKQ FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ipaB, CP0128 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5wkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wkq OCA], [http://pdbe.org/5wkq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5wkq RCSB], [http://www.ebi.ac.uk/pdbsum/5wkq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5wkq ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5wkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wkq OCA], [https://pdbe.org/5wkq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5wkq RCSB], [https://www.ebi.ac.uk/pdbsum/5wkq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5wkq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/IPAB_SHIFL IPAB_SHIFL]] Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. Forms a pore with IpaC, which is inserted into the host cell membrane through the Mxi/Spa apparatus, during cell contact. This pore probably allows the translocation of IpaA. IpaB has also been found to be necessary and sufficient to activate macrophage apoptosis by binding to interleukin-1 beta converting enzyme (ICE). Has also been shown to be important, along with IpaD, to block or regulate secretion through the Mxi/Spa translocon in the presence or absence of the secretion signal, respectively. Through interaction with host human MAD2L2, constitutively activates the anaphase-promoting complex APC and induces a cell cycle arrest to prevent epithelial renewal in order to promote bacterial colonization.<ref>PMID:17719540</ref> <ref>PMID:9009343</ref>
+
[https://www.uniprot.org/uniprot/IPAB_SHIFL IPAB_SHIFL] Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. Forms a pore with IpaC, which is inserted into the host cell membrane through the Mxi/Spa apparatus, during cell contact. This pore probably allows the translocation of IpaA. IpaB has also been found to be necessary and sufficient to activate macrophage apoptosis by binding to interleukin-1 beta converting enzyme (ICE). Has also been shown to be important, along with IpaD, to block or regulate secretion through the Mxi/Spa translocon in the presence or absence of the secretion signal, respectively. Through interaction with host human MAD2L2, constitutively activates the anaphase-promoting complex APC and induces a cell cycle arrest to prevent epithelial renewal in order to promote bacterial colonization.<ref>PMID:17719540</ref> <ref>PMID:9009343</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Shigella paradysenteriae weldin 1927]]
+
[[Category: Large Structures]]
-
[[Category: Barta, M L]]
+
[[Category: Shigella flexneri]]
-
[[Category: Battaile, K P]]
+
[[Category: Barta ML]]
-
[[Category: Lovell, S]]
+
[[Category: Battaile KP]]
-
[[Category: Picking, W D]]
+
[[Category: Lovell S]]
-
[[Category: Picking, W L]]
+
[[Category: Picking WD]]
-
[[Category: Ipab]]
+
[[Category: Picking WL]]
-
[[Category: Membrane protein]]
+
-
[[Category: Shigella]]
+
-
[[Category: T3ss]]
+
-
[[Category: Translocon]]
+
-
[[Category: Type iii secretion]]
+

Current revision

2.10 A resolution structure of IpaB (residues 74-242) from Shigella flexneri

PDB ID 5wkq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools