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| ==Structure of BmVAL-1== | | ==Structure of BmVAL-1== |
- | <StructureSection load='6any' size='340' side='right' caption='[[6any]], [[Resolution|resolution]] 2.25Å' scene=''> | + | <StructureSection load='6any' size='340' side='right'caption='[[6any]], [[Resolution|resolution]] 2.25Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6any]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bruma Bruma]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ANY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ANY FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6any]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Brugia_malayi Brugia malayi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ANY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ANY FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bm4233, BM_Bm4233 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6279 BRUMA])</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6any FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6any OCA], [http://pdbe.org/6any PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6any RCSB], [http://www.ebi.ac.uk/pdbsum/6any PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6any ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6any FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6any OCA], [https://pdbe.org/6any PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6any RCSB], [https://www.ebi.ac.uk/pdbsum/6any PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6any ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A0J9Y762_BRUMA A0A0J9Y762_BRUMA] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bruma]] | + | [[Category: Brugia malayi]] |
- | [[Category: Asojo, O A]] | + | [[Category: Large Structures]] |
- | [[Category: Ag5]] | + | [[Category: Asojo OA]] |
- | [[Category: Ancylostoma secreted protein]]
| + | |
- | [[Category: Antigen 5]]
| + | |
- | [[Category: Asp]]
| + | |
- | [[Category: Cap]]
| + | |
- | [[Category: Crisp]]
| + | |
- | [[Category: Cysteine-rich secretory protein]]
| + | |
- | [[Category: Excretory-secretory product]]
| + | |
- | [[Category: Lipid transport]]
| + | |
- | [[Category: Pathogenesis related-1]]
| + | |
- | [[Category: Pr-1]]
| + | |
- | [[Category: Sc7]]
| + | |
- | [[Category: Scp]]
| + | |
- | [[Category: Sperm coating protein]]
| + | |
- | [[Category: Sterol binding]]
| + | |
- | [[Category: Tap]]
| + | |
- | [[Category: Testis specific protein]]
| + | |
- | [[Category: Tpx]]
| + | |
- | [[Category: Val]]
| + | |
- | [[Category: Venom allergen-like]]
| + | |
- | [[Category: Venom antigen 5]]
| + | |
| Structural highlights
Function
A0A0J9Y762_BRUMA
Publication Abstract from PubMed
Brugia malayi is a causative agent of lymphatic filariasis, a major tropical disease. The infective L3 parasite stage releases immunomodulatory proteins including the venom allergen-like proteins (VALs), which are members of the SCP/TAPS (Sperm-coating protein/Tpx/antigen 5/pathogenesis related-1/Sc7) superfamily. BmVAL-1 is a major target of host immunity with >90% of infected B. malayi microfilaraemic cases being seropositive for antibodies to BmVAL-1. This study is part of ongoing efforts to characterize the structures and functions of important B. malayi proteins. Recombinant BmVAL-1 was produced using a plant expression system, crystallized and the structure was solved by molecular replacement and refined to 2.1A, revealing the characteristic alpha/beta/alpha sandwich topology of eukaryotic SCP/TAPS proteins. The protein has more than 45% loop regions and these flexible loops connect the helices and strands, which are longer than predicted based on other parasite SCP/TAPS protein structures. The large central cavity of BmVAL-1 is a prototypical CRISP cavity with two histidines required to bind divalent cations. The caveolin-binding motif (CBM) that mediates sterol binding in SCP/TAPS proteins is large and open in BmVAL-1 and is N-glycosylated. N-glycosylation of the CBM does not affect the ability of BmVAL-1 to bind sterol in vitro. BmVAL-1 complements the in vivo sterol export phenotype of yeast mutants lacking their endogenous SCP/TAPS proteins. The in vitro sterol-binding affinity of BmVAL-1 is comparable with Pry1, a yeast sterol transporting SCP/TAPS protein. Sterol binding of BmVAL-1 is dependent on divalent cations. BmVAL-1 also has a large open palmitate-binding cavity, which binds palmitate comparably to tablysin-15, a lipid-binding SCP/TAPS protein. The central cavity, CBM and palmitate-binding cavity of BmVAL-1 are interconnected within the monomer with channels that can serve as pathways for water molecules, cations and small molecules.
Crystal structure of Brugia malayi venom allergen-like protein-1 (BmVAL-1), a vaccine candidate for lymphatic filariasis.,Darwiche R, Lugo F, Drurey C, Varossieau K, Smant G, Wilbers RHP, Maizels RM, Schneiter R, Asojo OA Int J Parasitol. 2018 Mar 6. pii: S0020-7519(18)30041-9. doi:, 10.1016/j.ijpara.2017.12.003. PMID:29501266[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Darwiche R, Lugo F, Drurey C, Varossieau K, Smant G, Wilbers RHP, Maizels RM, Schneiter R, Asojo OA. Crystal structure of Brugia malayi venom allergen-like protein-1 (BmVAL-1), a vaccine candidate for lymphatic filariasis. Int J Parasitol. 2018 Mar 6. pii: S0020-7519(18)30041-9. doi:, 10.1016/j.ijpara.2017.12.003. PMID:29501266 doi:http://dx.doi.org/10.1016/j.ijpara.2017.12.003
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