6axt

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Current revision (14:28, 4 October 2023) (edit) (undo)
 
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<StructureSection load='6axt' size='340' side='right'caption='[[6axt]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='6axt' size='340' side='right'caption='[[6axt]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6axt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/9hiv1 9hiv1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AXT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6AXT FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6axt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AXT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6AXT FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4xfx|4xfx]], [[6axr|6axr]], [[6axs|6axs]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gag ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11676 9HIV1])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6axt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6axt OCA], [https://pdbe.org/6axt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6axt RCSB], [https://www.ebi.ac.uk/pdbsum/6axt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6axt ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6axt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6axt OCA], [http://pdbe.org/6axt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6axt RCSB], [http://www.ebi.ac.uk/pdbsum/6axt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6axt ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/GAG_HV1N5 GAG_HV1N5] Matrix protein p17 targets Gag and Gag-Pol polyproteins to the plasma membrane via a multipartite membrane binding signal, that includes its myristoylated N-terminus. Also mediates nuclear localization of the preintegration complex. Implicated in the release from host cell mediated by Vpu. Capsid protein p24 forms the conical core of the virus that encapsulates the genomic RNA-nucleocapsid complex. Nucleocapsid protein p7 encapsulates and protects viral dimeric unspliced (genomic) RNA. Binds these RNAs through its zinc fingers. p6-gag plays a role in budding of the assembled particle by interacting with the host class E VPS proteins TSG101 and PDCD6IP/AIP1 (By similarity).
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==See Also==
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*[[Gag polyprotein 3D structures|Gag polyprotein 3D structures]]
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human immunodeficiency virus 1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Gres, A T]]
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[[Category: Gres AT]]
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[[Category: Kirby, K A]]
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[[Category: Kirby KA]]
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[[Category: Sarafianos, S G]]
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[[Category: Sarafianos SG]]
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[[Category: Hexamer]]
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[[Category: Hiv-1 capsid protein]]
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[[Category: T58s/t107i/p122a mutant]]
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[[Category: Viral protein]]
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Current revision

Structure of the T58S/T107I/P122A mutant of the HIV-1 capsid protein

PDB ID 6axt

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