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| <StructureSection load='6dc4' size='340' side='right'caption='[[6dc4]], [[Resolution|resolution]] 1.70Å' scene=''> | | <StructureSection load='6dc4' size='340' side='right'caption='[[6dc4]], [[Resolution|resolution]] 1.70Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6dc4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DC4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DC4 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6dc4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DC4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DC4 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dc4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dc4 OCA], [http://pdbe.org/6dc4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dc4 RCSB], [http://www.ebi.ac.uk/pdbsum/6dc4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dc4 ProSAT]</span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dc4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dc4 OCA], [https://pdbe.org/6dc4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dc4 RCSB], [https://www.ebi.ac.uk/pdbsum/6dc4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dc4 ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q6GMX6_HUMAN Q6GMX6_HUMAN] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Human]] | + | [[Category: Homo sapiens]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Jones, H G]] | + | [[Category: Jones HG]] |
- | [[Category: McLellan, J S]] | + | [[Category: McLellan JS]] |
- | [[Category: Antibody]]
| + | |
- | [[Category: Fab]]
| + | |
- | [[Category: Immune system]]
| + | |
| Structural highlights
Function
Q6GMX6_HUMAN
Publication Abstract from PubMed
The respiratory syncytial virus (RSV) fusion (F) glycoprotein is a major target of neutralizing antibodies arising from natural infection, and antibodies that specifically bind to the prefusion conformation of RSV F generally demonstrate the greatest neutralization potency. Prefusion-stabilized RSV F variants have been engineered as vaccine antigens, but crystal structures of these variants have revealed conformational differences in a key antigenic site located at the apex of the trimer, referred to as antigenic site O. Currently, it is unclear if flexibility in this region is an inherent property of prefusion RSV F or if it is related to inadequate stabilization of site O in the engineered variants. Therefore, we set out to investigate the conformational flexibility of antigenic site O, as well as the ability of the human immune system to recognize alternative conformations of this site, by determining crystal structures of prefusion RSV F bound to neutralizing human-derived antibodies AM22 and RSD5. Both antibodies bound with high affinity and were specific for the prefusion conformation of RSV F. Crystal structures of the complexes revealed that the antibodies recognized distinct conformations of antigenic site O, each diverging at a conserved proline residue located in the middle of an alpha-helix. These data suggest that antigenic site O exists as an ensemble of conformations, with individual antibodies recognizing discrete states. Collectively, these results have implications for the refolding of pneumovirus and paramyxovirus fusion proteins and should inform development of prefusion-stabilized RSV F vaccine candidates.
Alternative conformations of a major antigenic site on RSV F.,Jones HG, Battles MB, Lin CC, Bianchi S, Corti D, McLellan JS PLoS Pathog. 2019 Jul 15;15(7):e1007944. doi: 10.1371/journal.ppat.1007944., eCollection 2019 Jul. PMID:31306469[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Jones HG, Battles MB, Lin CC, Bianchi S, Corti D, McLellan JS. Alternative conformations of a major antigenic site on RSV F. PLoS Pathog. 2019 Jul 15;15(7):e1007944. doi: 10.1371/journal.ppat.1007944., eCollection 2019 Jul. PMID:31306469 doi:http://dx.doi.org/10.1371/journal.ppat.1007944
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