This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7exr
From Proteopedia
(Difference between revisions)
| Line 4: | Line 4: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[7exr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EXR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EXR FirstGlance]. <br> | <table><tr><td colspan='2'>[[7exr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EXR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EXR FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900092:stachyose'>PRD_900092</scene>, <scene name='pdbligand=TTV:beta-D-psicofuranose'>TTV</scene>, <scene name='pdbligand=ZCD:alpha-D-idopyranose'>ZCD</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900092:stachyose'>PRD_900092</scene>, <scene name='pdbligand=TTV:beta-D-psicofuranose'>TTV</scene>, <scene name='pdbligand=ZCD:alpha-D-idopyranose'>ZCD</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7exr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7exr OCA], [https://pdbe.org/7exr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7exr RCSB], [https://www.ebi.ac.uk/pdbsum/7exr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7exr ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7exr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7exr OCA], [https://pdbe.org/7exr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7exr RCSB], [https://www.ebi.ac.uk/pdbsum/7exr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7exr ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/RFS6_ARATH RFS6_ARATH] Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers (By similarity). | [https://www.uniprot.org/uniprot/RFS6_ARATH RFS6_ARATH] Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers (By similarity). | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Galactosidase 3D structures|Galactosidase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
Current revision
Crystal structure of alkaline alpha-galactosidase D383A mutant from Arabidopsis thaliana complexed with Stachyose.
| |||||||||||
Categories: Arabidopsis thaliana | Large Structures | Chen CJ | Chen NC | Chuankhayan P | Guan HH | Huang YC | Lee RH | Lin CC | Nakagawa A | Yoshimura M
