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| <StructureSection load='3awf' size='340' side='right'caption='[[3awf]], [[Resolution|resolution]] 1.99Å' scene=''> | | <StructureSection load='3awf' size='340' side='right'caption='[[3awf]], [[Resolution|resolution]] 1.99Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[3awf]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Ascidia_intestinalis Ascidia intestinalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AWF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AWF FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3awf]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Ciona_intestinalis Ciona intestinalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AWF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AWF FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3awe|3awe]], [[3awg|3awg]]</div></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Ci-VSP ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7719 Ascidia intestinalis])</td></tr>
| + | |
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3awf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3awf OCA], [https://pdbe.org/3awf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3awf RCSB], [https://www.ebi.ac.uk/pdbsum/3awf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3awf ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3awf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3awf OCA], [https://pdbe.org/3awf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3awf RCSB], [https://www.ebi.ac.uk/pdbsum/3awf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3awf ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q4W8A1_CIOIN Q4W8A1_CIOIN] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Ascidia intestinalis]] | + | [[Category: Ciona intestinalis]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Matsuda, M]] | + | [[Category: Matsuda M]] |
- | [[Category: Nakagawa, A]] | + | [[Category: Nakagawa A]] |
- | [[Category: Okamura, Y]] | + | [[Category: Okamura Y]] |
- | [[Category: Sakata, S]] | + | [[Category: Sakata S]] |
- | [[Category: Suzuki, M]] | + | [[Category: Suzuki M]] |
- | [[Category: Takeshita, K]] | + | [[Category: Takeshita K]] |
- | [[Category: Yamashita, E]] | + | [[Category: Yamashita E]] |
- | [[Category: Hydrolase]]
| + | |
- | [[Category: Ion channel]]
| + | |
- | [[Category: Membrane protein]]
| + | |
- | [[Category: Phosphatase]]
| + | |
| Structural highlights
Function
Q4W8A1_CIOIN
Publication Abstract from PubMed
Ciona intestinalis voltage-sensing phosphatase (Ci-VSP) has a transmembrane voltage sensor domain and a cytoplasmic region sharing similarity to the phosphatase and tensin homolog (PTEN). It dephosphorylates phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate upon membrane depolarization. The cytoplasmic region is composed of a phosphatase domain and a putative membrane interaction domain, C2. Here we determined the crystal structures of the Ci-VSP cytoplasmic region in three distinct constructs, wild-type (248-576), wild-type (236-576), and G365A mutant (248-576). The crystal structure of WT-236 and G365A-248 had the disulfide bond between the catalytic residue Cys-363 and the adjacent residue Cys-310. On the other hand, the disulfide bond was not present in the crystal structure of WT-248. These suggest the possibility that Ci-VSP is regulated by reactive oxygen species as found in PTEN. These structures also revealed that the conformation of the TI loop in the active site of the Ci-VSP cytoplasmic region was distinct from the corresponding region of PTEN; Ci-VSP has glutamic acid (Glu-411) in the TI loop, orienting toward the center of active site pocket. Mutation of Glu-411 led to acquirement of increased activity toward phosphatidylinositol 3,5-bisphosphate, suggesting that this site is required for determining substrate specificity. Our results provide the basic information of the enzymatic mechanism of Ci-VSP.
Crystal structure of the cytoplasmic phosphatase and tensin homolog (PTEN)-like region of Ciona intestinalis voltage-sensing phosphatase provides insight into substrate specificity and redox regulation of the phosphoinositide phosphatase activity.,Matsuda M, Takeshita K, Kurokawa T, Sakata S, Suzuki M, Yamashita E, Okamura Y, Nakagawa A J Biol Chem. 2011 Jul 1;286(26):23368-77. Epub 2011 May 4. PMID:21543329[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Matsuda M, Takeshita K, Kurokawa T, Sakata S, Suzuki M, Yamashita E, Okamura Y, Nakagawa A. Crystal structure of the cytoplasmic phosphatase and tensin homolog (PTEN)-like region of Ciona intestinalis voltage-sensing phosphatase provides insight into substrate specificity and redox regulation of the phosphoinositide phosphatase activity. J Biol Chem. 2011 Jul 1;286(26):23368-77. Epub 2011 May 4. PMID:21543329 doi:10.1074/jbc.M110.214361
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