6dd5

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Current revision (06:03, 11 October 2023) (edit) (undo)
 
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==Crystal Structure of the Cas6 Domain of Marinomonas mediterranea MMB-1 Cas6-RT-Cas1 Fusion Protein==
==Crystal Structure of the Cas6 Domain of Marinomonas mediterranea MMB-1 Cas6-RT-Cas1 Fusion Protein==
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<StructureSection load='6dd5' size='340' side='right' caption='[[6dd5]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
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<StructureSection load='6dd5' size='340' side='right'caption='[[6dd5]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6dd5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eco57 Eco57]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DD5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DD5 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6dd5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O157:H7 Escherichia coli O157:H7] and [https://en.wikipedia.org/wiki/Marinomonas_mediterranea_MMB-1 Marinomonas mediterranea MMB-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DD5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAL:MALTOSE'>MAL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cas1, Marme_0669 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83334 ECO57])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PRD_900001:alpha-maltose'>PRD_900001</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dd5 OCA], [http://pdbe.org/6dd5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dd5 RCSB], [http://www.ebi.ac.uk/pdbsum/6dd5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dd5 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dd5 OCA], [https://pdbe.org/6dd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dd5 RCSB], [https://www.ebi.ac.uk/pdbsum/6dd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dd5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/MALE_ECO57 MALE_ECO57]] Involved in the high-affinity maltose membrane transport system MalEFGK. Initial receptor for the active transport of and chemotaxis toward maltooligosaccharides (By similarity).
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[https://www.uniprot.org/uniprot/MALE_ECOLI MALE_ECOLI] Involved in the high-affinity maltose membrane transport system MalEFGK. Initial receptor for the active transport of and chemotaxis toward maltooligosaccharides.[https://www.uniprot.org/uniprot/F2K1V9_MARM1 F2K1V9_MARM1] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.[HAMAP-Rule:MF_01470]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6dd5" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6dd5" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Maltose-binding protein 3D structures|Maltose-binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Eco57]]
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[[Category: Escherichia coli O157:H7]]
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[[Category: Fire, A Z]]
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[[Category: Large Structures]]
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[[Category: Koonin, E V]]
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[[Category: Marinomonas mediterranea MMB-1]]
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[[Category: Lambowitz, A M]]
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[[Category: Fire AZ]]
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[[Category: Lucas-Elio, P]]
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[[Category: Koonin EV]]
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[[Category: Makarova, K S]]
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[[Category: Lambowitz AM]]
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[[Category: Markham, L M]]
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[[Category: Lucas-Elio P]]
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[[Category: Mohr, G]]
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[[Category: Makarova KS]]
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[[Category: Sanchez-Amat, A]]
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[[Category: Markham LM]]
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[[Category: Silas, S]]
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[[Category: Mohr G]]
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[[Category: Stamos, J L]]
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[[Category: Sanchez-Amat A]]
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[[Category: Yao, J]]
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[[Category: Silas S]]
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[[Category: Crispr cas protein]]
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[[Category: Stamos JL]]
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[[Category: Endoribonuclease]]
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[[Category: Yao J]]
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[[Category: Hydrolase]]
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Current revision

Crystal Structure of the Cas6 Domain of Marinomonas mediterranea MMB-1 Cas6-RT-Cas1 Fusion Protein

PDB ID 6dd5

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