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6dfe

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Current revision (06:05, 11 October 2023) (edit) (undo)
 
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==The structure of a ternary complex of E. coli WaaC==
==The structure of a ternary complex of E. coli WaaC==
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<StructureSection load='6dfe' size='340' side='right' caption='[[6dfe]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
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<StructureSection load='6dfe' size='340' side='right'caption='[[6dfe]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6dfe]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DFE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DFE FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6dfe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DFE FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GA7:[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl+(2R)-1-{(2S,3S,4R,5S,6R)-6-[(1S)-1,2-dihydroxyethyl]-3,4,5-trihydroxytetrahydro-2H-pyran-2-yl}propan-2-yl+hydrogen+(R)-phosphate+(non-preferred+name)'>GA7</scene>, <scene name='pdbligand=GN1:2-(ACETYLAMINO)-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE'>GN1</scene>, <scene name='pdbligand=GN4:2-(acetylamino)-2-deoxy-4-O-phosphono-beta-D-glucopyranose'>GN4</scene>, <scene name='pdbligand=KDO:3-DEOXY-D-MANNO-OCT-2-ULOSONIC+ACID'>KDO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.31&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AL530_003015, AZZ83_001895, C1N95_02680, CT143_12860, CT146_13830, WM48_19965 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GA7:[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl+(2R)-1-{(2S,3S,4R,5S,6R)-6-[(1S)-1,2-dihydroxyethyl]-3,4,5-trihydroxytetrahydro-2H-pyran-2-yl}propan-2-yl+hydrogen+(R)-phosphate+(non-preferred+name)'>GA7</scene>, <scene name='pdbligand=GN1:2-(ACETYLAMINO)-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE'>GN1</scene>, <scene name='pdbligand=GN4:2-acetamido-2-deoxy-4-O-phosphono-beta-D-glucopyranose'>GN4</scene>, <scene name='pdbligand=KDO:3-DEOXY-D-MANNO-OCT-2-ULOSONIC+ACID'>KDO</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dfe OCA], [http://pdbe.org/6dfe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dfe RCSB], [http://www.ebi.ac.uk/pdbsum/6dfe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dfe ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dfe OCA], [https://pdbe.org/6dfe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dfe RCSB], [https://www.ebi.ac.uk/pdbsum/6dfe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dfe ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A152KUZ3_ECOLX A0A152KUZ3_ECOLX]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus coli migula 1895]]
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[[Category: Escherichia coli]]
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[[Category: Blaukopf, M]]
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[[Category: Large Structures]]
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[[Category: Strynadka, N C.J]]
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[[Category: Blaukopf M]]
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[[Category: Withers, S G]]
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[[Category: Strynadka NCJ]]
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[[Category: Worrall, L J]]
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[[Category: Withers SG]]
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[[Category: Llipopolysaccharide heptosyltransferase]]
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[[Category: Worrall LJ]]
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[[Category: Transferase]]
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Current revision

The structure of a ternary complex of E. coli WaaC

PDB ID 6dfe

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