6e48

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Current revision (06:18, 11 October 2023) (edit) (undo)
 
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<StructureSection load='6e48' size='340' side='right'caption='[[6e48]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='6e48' size='340' side='right'caption='[[6e48]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6e48]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice] and [http://en.wikipedia.org/wiki/Murine_norovirus_1 Murine norovirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6E48 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6E48 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6e48]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Murine_norovirus_1 Murine norovirus 1] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6E48 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6E48 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4OA:(3BETA,5BETA,14BETA,17ALPHA)-3-HYDROXYCHOLAN-24-OIC+ACID'>4OA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.801&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3lq6|3lq6]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4OA:(3BETA,5BETA,14BETA,17ALPHA)-3-HYDROXYCHOLAN-24-OIC+ACID'>4OA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD300lf, CLM1, DIR2, IREM1, LMIR3, PIGR3, IgSF13 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6e48 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6e48 OCA], [https://pdbe.org/6e48 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6e48 RCSB], [https://www.ebi.ac.uk/pdbsum/6e48 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6e48 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6e48 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6e48 OCA], [http://pdbe.org/6e48 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6e48 RCSB], [http://www.ebi.ac.uk/pdbsum/6e48 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6e48 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/CLM1_MOUSE CLM1_MOUSE]] Acts as an inhibitory receptor for myeloid cells and mast cells. Inhibits osteoclast formation. Induces macrophage cell death upon engagement.<ref>PMID:14662855</ref> <ref>PMID:17438331</ref> <ref>PMID:18097021</ref>
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[https://www.uniprot.org/uniprot/Q80J94_9CALI Q80J94_9CALI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6e48" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6e48" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
 
[[Category: Murine norovirus 1]]
[[Category: Murine norovirus 1]]
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[[Category: Fremont, D H]]
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[[Category: Mus musculus]]
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[[Category: Nelson, C A]]
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[[Category: Fremont DH]]
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[[Category: Bile acid]]
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[[Category: Nelson CA]]
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[[Category: Capsid protein]]
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[[Category: Clm-1]]
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[[Category: Clm1]]
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[[Category: Cmrf-35-like molecule-1]]
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[[Category: Dir2]]
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[[Category: Igsf13]]
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[[Category: Irem1]]
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[[Category: Lca]]
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[[Category: Lmir3]]
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[[Category: Myeloid receptor]]
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[[Category: Norovirus]]
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[[Category: Pigr3]]
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[[Category: Protruding domain]]
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[[Category: Viral protein]]
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Current revision

Crystal Structure of the Murine Norovirus VP1 P domain in complex with the CD300lf Receptor and Lithocholic Acid

PDB ID 6e48

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