6ofd

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Current revision (07:09, 11 October 2023) (edit) (undo)
 
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<StructureSection load='6ofd' size='340' side='right'caption='[[6ofd]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='6ofd' size='340' side='right'caption='[[6ofd]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6ofd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Phaseolus_vulgaris Phaseolus vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6OFD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6ofd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Phaseolus_vulgaris Phaseolus vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6OFD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MF1:[(S)-(naphthalen-1-yl)(octadecyloxy)methyl]phosphonic+acid'>MF1</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Acid_phosphatase Acid phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.2 3.1.3.2] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MF1:[(S)-(naphthalen-1-yl)(octadecyloxy)methyl]phosphonic+acid'>MF1</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ofd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ofd OCA], [http://pdbe.org/6ofd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ofd RCSB], [http://www.ebi.ac.uk/pdbsum/6ofd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ofd ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ofd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ofd OCA], [https://pdbe.org/6ofd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ofd RCSB], [https://www.ebi.ac.uk/pdbsum/6ofd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ofd ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PPAF_PHAVU PPAF_PHAVU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6ofd" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6ofd" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Acid phosphatase 3D structures|Acid phosphatase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Acid phosphatase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Phaseolus vulgaris]]
[[Category: Phaseolus vulgaris]]
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[[Category: Feder, D]]
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[[Category: Feder D]]
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[[Category: Guddat, L W]]
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[[Category: Guddat LW]]
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[[Category: Hussein, W M]]
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[[Category: Hussein WM]]
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[[Category: Kan, M W]]
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[[Category: Kan MW]]
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[[Category: McGeary, R P]]
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[[Category: McGeary RP]]
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[[Category: Schenk, G]]
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[[Category: Schenk G]]
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[[Category: Catalysis]]
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[[Category: Metal binding protein]]
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[[Category: Metallohydrolase]]
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[[Category: Osteoporosis]]
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[[Category: Purple acid phosphatase]]
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[[Category: Transition state]]
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Current revision

The crystal structure of octadecyloxy(naphthalen-1-yl)methylphosphonic acid in complex with red kidney bean purple acid phosphatase

PDB ID 6ofd

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