6oyz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:19, 11 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6oyz' size='340' side='right'caption='[[6oyz]], [[Resolution|resolution]] 3.62&Aring;' scene=''>
<StructureSection load='6oyz' size='340' side='right'caption='[[6oyz]], [[Resolution|resolution]] 3.62&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6oyz]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae] and [http://en.wikipedia.org/wiki/Camelus_glama Camelus glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OYZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6OYZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6oyz]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5] and [https://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OYZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6OYZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NKM:(2~{S},3~{S},4~{S})-2-[(1~{R})-2-azanyl-1-[(2~{S},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-methoxy-4-oxidanyl-oxolan-2-yl]-2-oxidanylidene-ethoxy]-3,4-bis(oxidanyl)-~{N}-[(3~{S})-2-oxidanylideneazepan-3-yl]-3,4-dihydro-2~{H}-pyran-6-carboxamide'>NKM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.62&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mraY, aq_053 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NKM:(2~{S},3~{S},4~{S})-2-[(1~{R})-2-azanyl-1-[(2~{S},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-methoxy-4-oxidanyl-oxolan-2-yl]-2-oxidanylidene-ethoxy]-3,4-bis(oxidanyl)-~{N}-[(3~{S})-2-oxidanylideneazepan-3-yl]-3,4-dihydro-2~{H}-pyran-6-carboxamide'>NKM</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phospho-N-acetylmuramoyl-pentapeptide-transferase Phospho-N-acetylmuramoyl-pentapeptide-transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.13 2.7.8.13] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6oyz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oyz OCA], [https://pdbe.org/6oyz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6oyz RCSB], [https://www.ebi.ac.uk/pdbsum/6oyz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6oyz ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6oyz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oyz OCA], [http://pdbe.org/6oyz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6oyz RCSB], [http://www.ebi.ac.uk/pdbsum/6oyz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6oyz ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MRAY_AQUAE MRAY_AQUAE]] First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (By similarity).
+
[https://www.uniprot.org/uniprot/MRAY_AQUAE MRAY_AQUAE] First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aquae]]
+
[[Category: Aquifex aeolicus VF5]]
-
[[Category: Camelus glama]]
+
[[Category: Lama glama]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Phospho-N-acetylmuramoyl-pentapeptide-transferase]]
+
[[Category: Lee SY]]
-
[[Category: Lee, S Y]]
+
[[Category: Mashalidis EH]]
-
[[Category: Mashalidis, E H]]
+
-
[[Category: Antibiotic target]]
+
-
[[Category: Integral membrane enzyme]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Membrane protein-transferase complex]]
+
-
[[Category: Membrane protein/transferase]]
+
-
[[Category: Peptidoglycan biosynthesis]]
+
-
[[Category: Translocase]]
+

Current revision

Crystal structure of MraY bound to capuramycin

PDB ID 6oyz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools