6oz6

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Current revision (07:20, 11 October 2023) (edit) (undo)
 
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<StructureSection load='6oz6' size='340' side='right'caption='[[6oz6]], [[Resolution|resolution]] 3.70&Aring;' scene=''>
<StructureSection load='6oz6' size='340' side='right'caption='[[6oz6]], [[Resolution|resolution]] 3.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6oz6]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae] and [http://en.wikipedia.org/wiki/Camelus_glama Camelus glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6OZ6 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6oz6]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5] and [https://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6OZ6 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NKD:(2~{S})-2-[[(2~{S})-1-[[(2~{S},3~{S})-3-[[(2~{S})-2-azanyl-3-(3-hydroxyphenyl)propanoyl]-methyl-amino]-1-[[(~{Z})-[(3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-ylidene]methyl]amino]-1-oxidanylidene-butan-2-yl]amino]-4-methylsulfanyl-1-oxidanylidene-butan-2-yl]carbamoylamino]-3-(3-hydroxyphenyl)propanoic+acid'>NKD</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.7&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mraY, aq_053 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NKD:(2~{S})-2-[[(2~{S})-1-[[(2~{S},3~{S})-3-[[(2~{S})-2-azanyl-3-(3-hydroxyphenyl)propanoyl]-methyl-amino]-1-[[(~{Z})-[(3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-ylidene]methyl]amino]-1-oxidanylidene-butan-2-yl]amino]-4-methylsulfanyl-1-oxidanylidene-butan-2-yl]carbamoylamino]-3-(3-hydroxyphenyl)propanoic+acid'>NKD</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phospho-N-acetylmuramoyl-pentapeptide-transferase Phospho-N-acetylmuramoyl-pentapeptide-transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.13 2.7.8.13] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6oz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oz6 OCA], [https://pdbe.org/6oz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6oz6 RCSB], [https://www.ebi.ac.uk/pdbsum/6oz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6oz6 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6oz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oz6 OCA], [http://pdbe.org/6oz6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6oz6 RCSB], [http://www.ebi.ac.uk/pdbsum/6oz6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6oz6 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/MRAY_AQUAE MRAY_AQUAE]] First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (By similarity).
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[https://www.uniprot.org/uniprot/MRAY_AQUAE MRAY_AQUAE] First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aquae]]
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[[Category: Aquifex aeolicus VF5]]
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[[Category: Camelus glama]]
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[[Category: Lama glama]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Phospho-N-acetylmuramoyl-pentapeptide-transferase]]
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[[Category: Lee SY]]
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[[Category: Lee, S Y]]
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[[Category: Mashalidis EH]]
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[[Category: Mashalidis, E H]]
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[[Category: Antibiotic target]]
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[[Category: Integral membrane enzyme]]
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[[Category: Membrane protein]]
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[[Category: Membrane protein-transferase complex]]
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[[Category: Peptidoglycan biosynthesis]]
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[[Category: Translocase]]
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Current revision

Crystal structure of MraY bound to 3'-hydroxymureidomycin A

PDB ID 6oz6

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