6wg9

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Current revision (14:24, 18 October 2023) (edit) (undo)
 
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==Crystal structure of tetracycline destructase Tet(X7)==
==Crystal structure of tetracycline destructase Tet(X7)==
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<StructureSection load='6wg9' size='340' side='right'caption='[[6wg9]]' scene=''>
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<StructureSection load='6wg9' size='340' side='right'caption='[[6wg9]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WG9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WG9 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6wg9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WG9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WG9 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wg9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wg9 OCA], [https://pdbe.org/6wg9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wg9 RCSB], [https://www.ebi.ac.uk/pdbsum/6wg9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wg9 ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wg9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wg9 OCA], [https://pdbe.org/6wg9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wg9 RCSB], [https://www.ebi.ac.uk/pdbsum/6wg9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wg9 ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Tetracycline resistance by antibiotic inactivation was first identified in commensal organisms but has since been reported in environmental and pathogenic microbes. Here, we identify and characterize an expanded pool of tet(X)-like genes in environmental and human commensal metagenomes via inactivation by antibiotic selection of metagenomic libraries. These genes formed two distinct clades according to habitat of origin, and resistance phenotypes were similarly correlated. Each gene isolated from the human gut encodes resistance to all tetracyclines tested, including eravacycline and omadacycline. We report a biochemical and structural characterization of one enzyme, Tet(X7). Further, we identify Tet(X7) in a clinical Pseudomonas aeruginosa isolate and demonstrate its contribution to tetracycline resistance. Lastly, we show anhydrotetracycline and semi-synthetic analogues inhibit Tet(X7) to prevent enzymatic tetracycline degradation and increase tetracycline efficacy against strains expressing tet(X7). This work improves our understanding of resistance by tetracycline-inactivation and provides the foundation for an inhibition-based strategy for countering resistance.
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Tetracycline-inactivating enzymes from environmental, human commensal, and pathogenic bacteria cause broad-spectrum tetracycline resistance.,Gasparrini AJ, Markley JL, Kumar H, Wang B, Fang L, Irum S, Symister CT, Wallace M, Burnham CD, Andleeb S, Tolia NH, Wencewicz TA, Dantas G Commun Biol. 2020 May 15;3(1):241. doi: 10.1038/s42003-020-0966-5. PMID:32415166<ref>PMID:32415166</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6wg9" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Pseudomonas aeruginosa]]
[[Category: Kumar H]]
[[Category: Kumar H]]
[[Category: Tolia NH]]
[[Category: Tolia NH]]

Current revision

Crystal structure of tetracycline destructase Tet(X7)

PDB ID 6wg9

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