7k3l

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Current revision (15:17, 18 October 2023) (edit) (undo)
 
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==Crystal structure of dLC8 in complex with Panoramix TQ peptide==
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<StructureSection load='7k3l' size='340' side='right'caption='[[7k3l]]' scene=''>
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<StructureSection load='7k3l' size='340' side='right'caption='[[7k3l]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7k3l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7K3L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7K3L FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7k3l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k3l OCA], [https://pdbe.org/7k3l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7k3l RCSB], [https://www.ebi.ac.uk/pdbsum/7k3l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7k3l ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7k3l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k3l OCA], [https://pdbe.org/7k3l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7k3l RCSB], [https://www.ebi.ac.uk/pdbsum/7k3l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7k3l ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DYL1_DROME DYL1_DROME] Acts as a non-catalytic accessory component of a dynein complex (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Nuclear Argonaute proteins, guided by their bound small RNAs to nascent target transcripts, mediate cotranscriptional silencing of transposons and repetitive genomic loci through heterochromatin formation. The molecular mechanisms involved in this process are incompletely understood. Here, we show that the SFiNX complex, a silencing mediator downstream from nuclear Piwi-piRNA complexes in Drosophila, facilitates cotranscriptional silencing as a homodimer. The dynein light chain protein Cut up/LC8 mediates SFiNX dimerization, and its function can be bypassed by a heterologous dimerization domain, arguing for a constitutive SFiNX dimer. Dimeric, but not monomeric SFiNX, is capable of forming molecular condensates in a nucleic acid-stimulated manner. Mutations that prevent SFiNX dimerization result in loss of condensate formation in vitro and the inability of Piwi to initiate heterochromatin formation and silence transposons in vivo. We propose that multivalent SFiNX-nucleic acid interactions are critical for heterochromatin establishment at piRNA target loci in a cotranscriptional manner.
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Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex.,Schnabl J, Wang J, Hohmann U, Gehre M, Batki J, Andreev VI, Purkhauser K, Fasching N, Duchek P, Novatchkova M, Mechtler K, Plaschka C, Patel DJ, Brennecke J Genes Dev. 2021 Mar 1;35(5-6):392-409. doi: 10.1101/gad.347989.120. Epub 2021 Feb , 11. PMID:33574069<ref>PMID:33574069</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7k3l" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Dynein 3D structures|Dynein 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Drosophila melanogaster]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Z-disk]]
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[[Category: Patel DJ]]
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[[Category: Wang J]]

Current revision

Crystal structure of dLC8 in complex with Panoramix TQ peptide

PDB ID 7k3l

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