7rv9
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal structure of the BCL6 BTB domain in complex with OICR-10269== | ==Crystal structure of the BCL6 BTB domain in complex with OICR-10269== | ||
| - | <StructureSection load='7rv9' size='340' side='right'caption='[[7rv9]]' scene=''> | + | <StructureSection load='7rv9' size='340' side='right'caption='[[7rv9]], [[Resolution|resolution]] 1.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RV9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RV9 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7rv9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RV9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RV9 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7rv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7rv9 OCA], [https://pdbe.org/7rv9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7rv9 RCSB], [https://www.ebi.ac.uk/pdbsum/7rv9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7rv9 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7SZ:N-[5-chloro-2-(4-methylpiperazin-1-yl)pyridin-4-yl]-2-{5-(3-cyano-4-hydroxy-5-methylphenyl)-3-[3-(1-methyl-1H-pyrazol-4-yl)prop-2-yn-1-yl]-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl}acetamide'>7SZ</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7rv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7rv9 OCA], [https://pdbe.org/7rv9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7rv9 RCSB], [https://www.ebi.ac.uk/pdbsum/7rv9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7rv9 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Disease == | ||
| + | [https://www.uniprot.org/uniprot/BCL6_HUMAN BCL6_HUMAN] Note=Chromosomal aberrations involving BCL6 may be a cause of B-cell non-Hodgkin lymphoma. Translocation t(3;14)(q27;q32); translocation t(3;22)(q27;q11) with immunoglobulin gene regions. Note=A chromosomal aberration involving BCL6 may be a cause of a form of B-cell leukemia. Translocation t(3;11)(q27;q23) with POU2AF1/OBF1. Note=A chromosomal aberration involving BCL6 may be a cause of lymphoma. Translocation t(3;4)(q27;p11) with ARHH/TTF. | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/BCL6_HUMAN BCL6_HUMAN] Transcriptional repressor which is required for germinal center formation and antibody affinity maturation. Probably plays an important role in lymphomagenesis.<ref>PMID:9649500</ref> <ref>PMID:18280243</ref> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Kuntz DA]] | [[Category: Kuntz DA]] | ||
[[Category: Prive GG]] | [[Category: Prive GG]] | ||
Current revision
Crystal structure of the BCL6 BTB domain in complex with OICR-10269
| |||||||||||
