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1nmp

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[[Image:1nmp.jpg|left|200px]]
[[Image:1nmp.jpg|left|200px]]
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{{Structure
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|PDB= 1nmp |SIZE=350|CAPTION= <scene name='initialview01'>1nmp</scene>, resolution 2.20&Aring;
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The line below this paragraph, containing "STRUCTURE_1nmp", creates the "Structure Box" on the page.
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|SITE=
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|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
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|ACTIVITY=
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|GENE= YBGI OR B0710 OR Z0861 OR ECS0735 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id= Escherichia coli, and Escherichia coli O157:H7])
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|DOMAIN=
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{{STRUCTURE_1nmp| PDB=1nmp | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1nmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nmp OCA], [http://www.ebi.ac.uk/pdbsum/1nmp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1nmp RCSB]</span>
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}}
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'''Structural genomics, ybgI protein, unknown function'''
'''Structural genomics, ybgI protein, unknown function'''
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[[Category: S2F, Structure 2.Function Project.]]
[[Category: S2F, Structure 2.Function Project.]]
[[Category: Teplyakov, A.]]
[[Category: Teplyakov, A.]]
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[[Category: hypothetical protein]]
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[[Category: Hypothetical protein]]
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[[Category: s2f]]
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[[Category: S2f]]
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[[Category: structural genomic]]
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[[Category: Structural genomic]]
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[[Category: structure 2 function project]]
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[[Category: Structure 2 function project]]
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[[Category: toroidal structure]]
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[[Category: Toroidal structure]]
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[[Category: ybgi]]
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[[Category: Ybgi]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 02:43:04 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:32:32 2008''
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Revision as of 23:43, 2 May 2008

Image:1nmp.jpg

Template:STRUCTURE 1nmp

Structural genomics, ybgI protein, unknown function


Overview

BACKGROUND: The protein encoded by the gene ybgI was chosen as a target for a structural genomics project emphasizing the relation of protein structure to function. RESULTS: The structure of the ybgI protein is a toroid composed of six polypeptide chains forming a trimer of dimers. Each polypeptide chain binds two metal ions on the inside of the toroid. CONCLUSION: The toroidal structure is comparable to that of some proteins that are involved in DNA metabolism. The di-nuclear metal site could imply that the specific function of this protein is as a hydrolase-oxidase enzyme.

About this Structure

1NMP is a Single protein structure of sequence from Escherichia coli, and escherichia coli o157:h7. Full crystallographic information is available from OCA.

Reference

Crystal structure of Escherichia coli protein ybgI, a toroidal structure with a dinuclear metal site., Ladner JE, Obmolova G, Teplyakov A, Howard AJ, Khil PP, Camerini-Otero RD, Gilliland GL, BMC Struct Biol. 2003 Sep 30;3:7. PMID:14519207 Page seeded by OCA on Sat May 3 02:43:04 2008

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