This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5lhf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:25, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5lhf' size='340' side='right'caption='[[5lhf]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
<StructureSection load='5lhf' size='340' side='right'caption='[[5lhf]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5lhf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LHF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5LHF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5lhf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis_KOD1 Thermococcus kodakarensis KOD1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LHF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LHF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">trpF, TK0256 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69014 Pyrococcus kodakaraensis (strain KOD1)])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoribosylanthranilate_isomerase Phosphoribosylanthranilate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.24 5.3.1.24] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lhf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lhf OCA], [https://pdbe.org/5lhf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lhf RCSB], [https://www.ebi.ac.uk/pdbsum/5lhf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lhf ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5lhf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lhf OCA], [http://pdbe.org/5lhf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lhf RCSB], [http://www.ebi.ac.uk/pdbsum/5lhf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lhf ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TRPF_THEKO TRPF_THEKO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Phosphoribosylanthranilate isomerase]]
+
[[Category: Thermococcus kodakarensis KOD1]]
-
[[Category: Papageorgiou, A C]]
+
[[Category: Papageorgiou AC]]
-
[[Category: Perveen, S]]
+
[[Category: Perveen S]]
-
[[Category: Rashid, N]]
+
[[Category: Rashid N]]
-
[[Category: Isomerase]]
+
-
[[Category: Protein stability]]
+
-
[[Category: Tim barrel]]
+
-
[[Category: Tryptophan biosynthesis]]
+

Current revision

Phosphoribosyl anthranilate isomerase from Thermococcus kodakaraensis

PDB ID 5lhf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5lhf"
Personal tools