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5lu5

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Current revision (18:49, 18 October 2023) (edit) (undo)
 
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<StructureSection load='5lu5' size='340' side='right'caption='[[5lu5]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
<StructureSection load='5lu5' size='340' side='right'caption='[[5lu5]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5lu5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pseudomallei"_whitmore_1913 "bacillus pseudomallei" whitmore 1913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LU5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LU5 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5lu5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LU5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LU5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=M7P:D-GLYCERO-D-MANNOPYRANOSE-7-PHOSPHATE'>M7P</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gmhA, DP49_467 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 "Bacillus pseudomallei" Whitmore 1913])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=M7P:D-GLYCERO-D-MANNOPYRANOSE-7-PHOSPHATE'>M7P</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-sedoheptulose_7-phosphate_isomerase D-sedoheptulose 7-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.28 5.3.1.28] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lu5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lu5 OCA], [https://pdbe.org/5lu5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lu5 RCSB], [https://www.ebi.ac.uk/pdbsum/5lu5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lu5 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lu5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lu5 OCA], [http://pdbe.org/5lu5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lu5 RCSB], [http://www.ebi.ac.uk/pdbsum/5lu5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lu5 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/A0A095TT41_BURPE A0A095TT41_BURPE]] Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.[HAMAP-Rule:MF_00067][SAAS:SAAS00846114]
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[https://www.uniprot.org/uniprot/GMHA_BURPS GMHA_BURPS] Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.<ref>PMID:20447408</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus pseudomallei whitmore 1913]]
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[[Category: Burkholderia pseudomallei]]
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[[Category: D-sedoheptulose 7-phosphate isomerase]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Harmer, N J]]
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[[Category: Harmer NJ]]
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[[Category: Pang, J]]
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[[Category: Pang J]]
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[[Category: Vivoli, M]]
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[[Category: Vivoli M]]
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[[Category: Cooperativity]]
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[[Category: Enzyme kinetic]]
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[[Category: Hydrogen bond]]
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[[Category: Isomerase]]
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[[Category: Molecular modelling]]
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[[Category: Quantum mechanic]]
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Current revision

A quantum half-site enzyme

PDB ID 5lu5

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