1j2b
From Proteopedia
(Difference between revisions)
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<StructureSection load='1j2b' size='340' side='right'caption='[[1j2b]], [[Resolution|resolution]] 3.30Å' scene=''> | <StructureSection load='1j2b' size='340' side='right'caption='[[1j2b]], [[Resolution|resolution]] 3.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1j2b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1j2b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J2B FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j2b OCA], [https://pdbe.org/1j2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j2b RCSB], [https://www.ebi.ac.uk/pdbsum/1j2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j2b ProSAT], [https://www.topsan.org/Proteins/RSGI/1j2b TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j2b OCA], [https://pdbe.org/1j2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j2b RCSB], [https://www.ebi.ac.uk/pdbsum/1j2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j2b ProSAT], [https://www.topsan.org/Proteins/RSGI/1j2b TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/ATGT_PYRHO ATGT_PYRHO] Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs.[HAMAP-Rule:MF_01634] | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
| - | *[[TRNA-guanine transglycosylase|TRNA-guanine transglycosylase]] | + | *[[TRNA-guanine transglycosylase 3D structures|TRNA-guanine transglycosylase 3D structures]] |
*[[Transfer RNA (tRNA)|Transfer RNA (tRNA)]] | *[[Transfer RNA (tRNA)|Transfer RNA (tRNA)]] | ||
== References == | == References == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Pyrococcus shinkaii]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Ishitani | + | [[Category: Pyrococcus horikoshii]] |
| - | [[Category: Nameki | + | [[Category: Ishitani R]] |
| - | [[Category: Nishimura | + | [[Category: Nameki N]] |
| - | [[Category: Nureki | + | [[Category: Nishimura S]] |
| - | [[Category: Okada | + | [[Category: Nureki O]] |
| - | + | [[Category: Okada N]] | |
| - | [[Category: Yokoyama | + | [[Category: Yokoyama S]] |
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Current revision
Crystal Structure Of Archaeosine tRNA-Guanine Transglycosylase Complexed With lambda-form tRNA(Val)
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