This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ywg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:13, 25 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1ywg' size='340' side='right'caption='[[1ywg]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='1ywg' size='340' side='right'caption='[[1ywg]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1ywg]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Plafa Plafa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YWG OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1YWG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1ywg]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YWG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YWG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">3D7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5833 PLAFA])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glyceraldehyde-3-phosphate_dehydrogenase_(phosphorylating) Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.12 1.2.1.12] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ywg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ywg OCA], [https://pdbe.org/1ywg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ywg RCSB], [https://www.ebi.ac.uk/pdbsum/1ywg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ywg ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1ywg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ywg OCA], [http://pdbe.org/1ywg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ywg RCSB], [http://www.ebi.ac.uk/pdbsum/1ywg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ywg ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8T6B1_PLAFA Q8T6B1_PLAFA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 38:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Plafa]]
+
[[Category: Plasmodium falciparum]]
-
[[Category: Adisa, A]]
+
[[Category: Adisa A]]
-
[[Category: Alpyurek, A E]]
+
[[Category: Alpyurek AE]]
-
[[Category: Colman, P M]]
+
[[Category: Colman PM]]
-
[[Category: Klonis, N]]
+
[[Category: Klonis N]]
-
[[Category: Malby, R L]]
+
[[Category: Malby RL]]
-
[[Category: Satchell, J F]]
+
[[Category: Satchell JF]]
-
[[Category: Tilley, L]]
+
[[Category: Tilley L]]
-
[[Category: Dehydrogenase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Rossmann fold]]
+
-
[[Category: Tetrameric]]
+

Current revision

The structure of glyceraldehyde-3-phosphate dehydrogenase from Plasmodium falciparum

PDB ID 1ywg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools