2dxt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:31, 25 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2dxt' size='340' side='right'caption='[[2dxt]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='2dxt' size='340' side='right'caption='[[2dxt]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2dxt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/'pyrococcus_shinkaii' 'pyrococcus shinkaii']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DXT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DXT FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2dxt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DXT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DXT FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=BTN:BIOTIN'>BTN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1wqw|1wqw]], [[2dxu|2dxu]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=BTN:BIOTIN'>BTN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">birA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 'Pyrococcus shinkaii'])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Biotin--[acetyl-CoA-carboxylase]_ligase Biotin--[acetyl-CoA-carboxylase] ligase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.4.15 6.3.4.15] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dxt OCA], [https://pdbe.org/2dxt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dxt RCSB], [https://www.ebi.ac.uk/pdbsum/2dxt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dxt ProSAT], [https://www.topsan.org/Proteins/RSGI/2dxt TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dxt OCA], [https://pdbe.org/2dxt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dxt RCSB], [https://www.ebi.ac.uk/pdbsum/2dxt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dxt ProSAT], [https://www.topsan.org/Proteins/RSGI/2dxt TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O57883_PYRHO O57883_PYRHO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 25: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Pyrococcus shinkaii]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Bagautdinov, B]]
+
[[Category: Pyrococcus horikoshii]]
-
[[Category: Kunishima, N]]
+
[[Category: Bagautdinov B]]
-
[[Category: Matsuura, Y]]
+
[[Category: Kunishima N]]
-
[[Category: Structural genomic]]
+
[[Category: Matsuura Y]]
-
[[Category: Biotin biosynthesis]]
+
-
[[Category: Dimer]]
+
-
[[Category: Ligase]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Rsgi]]
+

Current revision

Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Complexed with ATP and Biotin, Mutation D104A

PDB ID 2dxt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools