This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ej1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:41, 25 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2ej1' size='340' side='right'caption='[[2ej1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='2ej1' size='340' side='right'caption='[[2ej1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ej1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"ruminiclostridium_thermocellum"_(viljoen_et_al._1926)_yutin_and_galperin_2013 "ruminiclostridium thermocellum" (viljoen et al. 1926) yutin and galperin 2013]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EJ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EJ1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ej1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EJ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EJ1 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2e4t|2e4t]], [[2e0p|2e0p]], [[2eex|2eex]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PRD_900020:beta-cellohexaose'>PRD_900020</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CelJ, CelJ-Cel9D-Cel44A ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1515 "Ruminiclostridium thermocellum" (Viljoen et al. 1926) Yutin and Galperin 2013])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ej1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ej1 OCA], [https://pdbe.org/2ej1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ej1 RCSB], [https://www.ebi.ac.uk/pdbsum/2ej1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ej1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ej1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ej1 OCA], [https://pdbe.org/2ej1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ej1 RCSB], [https://www.ebi.ac.uk/pdbsum/2ej1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ej1 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A3DD30_ACET2 A3DD30_ACET2]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 35: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Acetivibrio thermocellus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Karita, S]]
+
[[Category: Karita S]]
-
[[Category: Kitago, Y]]
+
[[Category: Kitago Y]]
-
[[Category: Sakka, K]]
+
[[Category: Sakka K]]
-
[[Category: Tanaka, I]]
+
[[Category: Tanaka I]]
-
[[Category: Watanabe, N]]
+
[[Category: Watanabe N]]
-
[[Category: Beta-sandwich]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: The composite domain of gh family 5]]
+
-
[[Category: Tim-barrel]]
+
-
[[Category: Tim-like barrel]]
+

Current revision

Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum

PDB ID 2ej1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ej1"
Personal tools