2odp
From Proteopedia
(Difference between revisions)
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<StructureSection load='2odp' size='340' side='right'caption='[[2odp]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='2odp' size='340' side='right'caption='[[2odp]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2odp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2odp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ODP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ODP FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PRD_900017:triacetyl-beta-chitotriose'>PRD_900017</scene></td></tr> |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2odp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2odp OCA], [https://pdbe.org/2odp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2odp RCSB], [https://www.ebi.ac.uk/pdbsum/2odp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2odp ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2odp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2odp OCA], [https://pdbe.org/2odp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2odp RCSB], [https://www.ebi.ac.uk/pdbsum/2odp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2odp ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | == Disease == | ||
- | [[https://www.uniprot.org/uniprot/CO2_HUMAN CO2_HUMAN]] Defects in C2 are the cause of complement component 2 deficiency (C2D) [MIM:[https://omim.org/entry/217000 217000]]. A deficiency of the complement classical pathway associated with the development of autoimmune disorders, mainly systemic lupus erythematosus. Skin and joint manifestations are common and renal disease is relatively rare. Patients with complement component 2 deficiency are also reported to have recurrent or invasive infections.<ref>PMID:8621452</ref> <ref>PMID:9670930</ref> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/Q5JP69_HUMAN Q5JP69_HUMAN] Component C2 which is part of the classical pathway of the complement system is cleaved by activated factor C1 into two fragments: C2b and C2a. C2a, a serine protease, then combines with complement factor C4b to generate the C3 or C5 convertase.[ARBA:ARBA00025003] | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
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[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Krishnan | + | [[Category: Krishnan V]] |
- | [[Category: Narayana | + | [[Category: Narayana SVL]] |
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Revision as of 08:57, 25 October 2023
Complement component C2a, the catalytic fragment of C3- and C5-convertase of human complement
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