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2zxi

From Proteopedia

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Current revision (14:01, 1 November 2023) (edit) (undo)
 
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<StructureSection load='2zxi' size='340' side='right'caption='[[2zxi]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='2zxi' size='340' side='right'caption='[[2zxi]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2zxi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZXI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZXI FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2zxi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZXI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZXI FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2zxh|2zxh]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aq_761 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 "Aquifex aeolicus" Huber and Stetter 2001])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zxi OCA], [https://pdbe.org/2zxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zxi RCSB], [https://www.ebi.ac.uk/pdbsum/2zxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zxi ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zxi OCA], [https://pdbe.org/2zxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zxi RCSB], [https://www.ebi.ac.uk/pdbsum/2zxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zxi ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/MNMG_AQUAE MNMG_AQUAE]] NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (By similarity).[HAMAP-Rule:MF_00129]
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[https://www.uniprot.org/uniprot/MNMG_AQUAE MNMG_AQUAE] NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (By similarity).[HAMAP-Rule:MF_00129]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aquifex aeolicus huber and stetter 2001]]
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[[Category: Aquifex aeolicus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Numata, T]]
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[[Category: Numata T]]
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[[Category: Osawa, T]]
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[[Category: Osawa T]]
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[[Category: 5-carboxymethylaminomethyl uridine]]
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[[Category: Fad]]
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[[Category: Fad-binding protein]]
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[[Category: Modification]]
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[[Category: Trna]]
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[[Category: Trna modification enzyme]]
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[[Category: Wobble uridine]]
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Current revision

Structure of Aquifex aeolicus GidA in the form II crystal

PDB ID 2zxi

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