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2zzd

From Proteopedia

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Current revision (14:03, 1 November 2023) (edit) (undo)
 
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<StructureSection load='2zzd' size='340' side='right'caption='[[2zzd]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
<StructureSection load='2zzd' size='340' side='right'caption='[[2zzd]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2zzd]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_thiocyanoxidans"_happold_and_key_1937 "bacterium thiocyanoxidans" happold and key 1937]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZZD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZZD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2zzd]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Thiobacillus_thioparus Thiobacillus thioparus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZZD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZZD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3CO:COBALT+(III)+ION'>3CO</scene>, <scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3CO:COBALT+(III)+ION'>3CO</scene>, <scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2dd4|2dd4]], [[2dd5|2dd5]], [[2dxb|2dxb]], [[2dxc|2dxc]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">scnA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=931 "Bacterium thiocyanoxidans" Happold and Key 1937]), scnB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=931 "Bacterium thiocyanoxidans" Happold and Key 1937]), scnC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=931 "Bacterium thiocyanoxidans" Happold and Key 1937])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Thiocyanate_hydrolase Thiocyanate hydrolase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.5.8 3.5.5.8] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zzd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zzd OCA], [https://pdbe.org/2zzd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zzd RCSB], [https://www.ebi.ac.uk/pdbsum/2zzd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zzd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zzd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zzd OCA], [https://pdbe.org/2zzd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zzd RCSB], [https://www.ebi.ac.uk/pdbsum/2zzd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zzd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/SCNA_THITI SCNA_THITI]] Involved in the degradation of thiocyanate. [[https://www.uniprot.org/uniprot/SCNC_THITI SCNC_THITI]] Involved in the degradation of thiocyanate. [[https://www.uniprot.org/uniprot/SCNB_THITI SCNB_THITI]] Involved in the degradation of thiocyanate.
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[https://www.uniprot.org/uniprot/SCNA_THITI SCNA_THITI] Involved in the degradation of thiocyanate.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacterium thiocyanoxidans happold and key 1937]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Thiocyanate hydrolase]]
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[[Category: Thiobacillus thioparus]]
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[[Category: Arakawa, T]]
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[[Category: Arakawa T]]
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[[Category: Katayama, Y]]
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[[Category: Katayama Y]]
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[[Category: Kawano, Y]]
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[[Category: Kawano Y]]
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[[Category: Odaka, M]]
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[[Category: Odaka M]]
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[[Category: Yohda, M]]
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[[Category: Yohda M]]
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[[Category: Air inactivation]]
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[[Category: Autocatalytic activation]]
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[[Category: Carbonyl sulfide]]
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[[Category: Claw setting]]
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[[Category: Cobalt]]
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[[Category: Complex]]
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[[Category: Cysteine]]
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[[Category: Enzyme]]
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[[Category: Hydrolase]]
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[[Category: Metal-binding]]
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[[Category: Metalloprotein]]
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[[Category: Model complex]]
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[[Category: Nitrile hydratase]]
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[[Category: Non-corrin]]
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[[Category: Oxidation]]
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[[Category: Post-translational modification]]
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[[Category: Protein]]
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[[Category: Scnase]]
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[[Category: Sulfenate]]
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[[Category: Sulfenic acid]]
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[[Category: Sulfinate]]
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[[Category: Sulfinic acid]]
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[[Category: Thiocyanate]]
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Current revision

Recombinant thiocyanate hydrolase, air-oxidized form of holo-enzyme

PDB ID 2zzd

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OCA

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