This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3a9r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:16, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3a9r' size='340' side='right'caption='[[3a9r]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
<StructureSection load='3a9r' size='340' side='right'caption='[[3a9r]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3a9r]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_51176 Atcc 51176]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A9R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A9R FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3a9r]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeribacillus_pallidus Aeribacillus pallidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A9R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A9R FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.77&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3a9s|3a9s]], [[3a9t|3a9t]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dai ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=33936 ATCC 51176])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/D-arabinose_isomerase D-arabinose isomerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.3 5.3.1.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a9r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a9r OCA], [https://pdbe.org/3a9r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a9r RCSB], [https://www.ebi.ac.uk/pdbsum/3a9r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a9r ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a9r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a9r OCA], [https://pdbe.org/3a9r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a9r RCSB], [https://www.ebi.ac.uk/pdbsum/3a9r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a9r ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/C0SSE7_9BACI C0SSE7_9BACI]] Converts the aldose L-fucose into the corresponding ketose L-fuculose.[HAMAP-Rule:MF_01254]
+
[https://www.uniprot.org/uniprot/C0SSE7_9BACI C0SSE7_9BACI] Converts the aldose L-fucose into the corresponding ketose L-fuculose.[HAMAP-Rule:MF_01254]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 35: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 51176]]
+
[[Category: Aeribacillus pallidus]]
-
[[Category: D-arabinose isomerase]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Izumori, K]]
+
[[Category: Izumori K]]
-
[[Category: Kamitori, S]]
+
[[Category: Kamitori S]]
-
[[Category: Takeda, K]]
+
[[Category: Takeda K]]
-
[[Category: Yoshida, H]]
+
[[Category: Yoshida H]]
-
[[Category: Beta barrel]]
+
-
[[Category: Carbohydrate metabolism]]
+
-
[[Category: Cytoplasm]]
+
-
[[Category: Fucose metabolism]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Manganese]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Rossmann fold]]
+

Current revision

X-ray Structures of Bacillus pallidus D-Arabinose IsomeraseComplex with (4R)-2-METHYLPENTANE-2,4-DIOL

PDB ID 3a9r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3a9r"
Personal tools