This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ahh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:26, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3ahh' size='340' side='right'caption='[[3ahh]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3ahh' size='340' side='right'caption='[[3ahh]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ahh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bifidobacterium_parvulorum"_reuter_1963 "bifidobacterium parvulorum" reuter 1963]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AHH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ahh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bifidobacterium_breve Bifidobacterium breve]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AHH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HTL:2-ACETYL-THIAMINE+DIPHOSPHATE'>HTL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ahc|3ahc]], [[3ahd|3ahd]], [[3ahe|3ahe]], [[3ahf|3ahf]], [[3ahg|3ahg]], [[3ahi|3ahi]], [[3ahj|3ahj]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HTL:2-ACETYL-THIAMINE+DIPHOSPHATE'>HTL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xfp ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1685 "Bifidobacterium parvulorum" Reuter 1963])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Fructose-6-phosphate_phosphoketolase Fructose-6-phosphate phosphoketolase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.22 4.1.2.22] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ahh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahh OCA], [https://pdbe.org/3ahh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ahh RCSB], [https://www.ebi.ac.uk/pdbsum/3ahh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ahh ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ahh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahh OCA], [https://pdbe.org/3ahh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ahh RCSB], [https://www.ebi.ac.uk/pdbsum/3ahh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ahh ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D6PAH1_BIFBR D6PAH1_BIFBR]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 33: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bifidobacterium parvulorum reuter 1963]]
+
[[Category: Bifidobacterium breve]]
-
[[Category: Fructose-6-phosphate phosphoketolase]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Ashida, H]]
+
[[Category: Ashida H]]
-
[[Category: Fushinobu, S]]
+
[[Category: Fushinobu S]]
-
[[Category: Katayama, T]]
+
[[Category: Katayama T]]
-
[[Category: Kim, B J]]
+
[[Category: Kim B-J]]
-
[[Category: Shoun, H]]
+
[[Category: Shoun H]]
-
[[Category: Suzuki, R]]
+
[[Category: Suzuki R]]
-
[[Category: Wakagi, T]]
+
[[Category: Wakagi T]]
-
[[Category: Yamamoto, K]]
+
[[Category: Yamamoto K]]
-
[[Category: Acetyl thiamine diphosphate]]
+
-
[[Category: Alpha-beta fold]]
+
-
[[Category: Homodimer]]
+
-
[[Category: Lyase]]
+
-
[[Category: Thiamine diphosphate-dependent enzyme]]
+

Current revision

H142A mutant of Phosphoketolase from Bifidobacterium Breve complexed with acetyl thiamine diphosphate

PDB ID 3ahh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ahh"
Personal tools