3e7x

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Current revision (15:19, 1 November 2023) (edit) (undo)
 
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<StructureSection load='3e7x' size='340' side='right'caption='[[3e7x]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='3e7x' size='340' side='right'caption='[[3e7x]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3e7x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E7X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E7X FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3e7x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E7X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E7X FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1amu|1amu]], [[1md9|1md9]], [[2dls|2dls]], [[1ba3|1ba3]], [[1pg4|1pg4]], [[1hqb|1hqb]], [[3e7w|3e7w]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dltA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/D-alanine--poly(phosphoribitol)_ligase D-alanine--poly(phosphoribitol) ligase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.13 6.1.1.13] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e7x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e7x OCA], [https://pdbe.org/3e7x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e7x RCSB], [https://www.ebi.ac.uk/pdbsum/3e7x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e7x ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e7x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e7x OCA], [https://pdbe.org/3e7x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e7x RCSB], [https://www.ebi.ac.uk/pdbsum/3e7x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e7x ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/DLTA_BACSU DLTA_BACSU]] Involved in the biosynthesis of D-alanyl-lipoteichoic acid (LTA). Catalyzes an ATP-dependent two-step reaction where it forms a high energy D-alanyl AMP intermediate and transfers the alanyl residues from AMP to Dcp.
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[https://www.uniprot.org/uniprot/DLTA_BACSU DLTA_BACSU] Involved in the biosynthesis of D-alanyl-lipoteichoic acid (LTA). Catalyzes an ATP-dependent two-step reaction where it forms a high energy D-alanyl AMP intermediate and transfers the alanyl residues from AMP to Dcp.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Vibrio subtilis ehrenberg 1835]]
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[[Category: Bacillus subtilis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Marahiel, M A]]
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[[Category: Marahiel MA]]
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[[Category: May, J J]]
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[[Category: May JJ]]
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[[Category: Neumann, P]]
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[[Category: Neumann P]]
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[[Category: Stubbs, M T]]
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[[Category: Stubbs MT]]
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[[Category: Yonus, H]]
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[[Category: Yonus H]]
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[[Category: Zimmermann, S]]
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[[Category: Zimmermann S]]
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[[Category: Adenylation domain]]
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[[Category: Amp]]
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[[Category: Cytoplasm]]
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[[Category: D-alanine-dalanyl]]
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[[Category: D-alanylation]]
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[[Category: Dlta]]
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[[Category: Ligase]]
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[[Category: Non-ribosomal peptide synthetase]]
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[[Category: Nrp]]
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Current revision

Crystal structure of DLTA: implications for the reaction mechanism of non-ribosomal peptide synthetase (NRPS) adenylation domains

PDB ID 3e7x

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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