3fl0

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Current revision (15:30, 1 November 2023) (edit) (undo)
 
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<StructureSection load='3fl0' size='340' side='right'caption='[[3fl0]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
<StructureSection load='3fl0' size='340' side='right'caption='[[3fl0]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3fl0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bovin Bovin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FL0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3fl0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FL0 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CGP:2-DEOXYCYTIDINE-2-DEOXYGUANOSINE-3,5-MONOPHOSPHATE'>CGP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=YCM:S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE'>YCM</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CGP:2-DEOXYCYTIDINE-2-DEOXYGUANOSINE-3,5-MONOPHOSPHATE'>CGP</scene>, <scene name='pdbligand=YCM:S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE'>YCM</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1tq9|1tq9]], [[3bcp|3bcp]], [[1bsr|1bsr]], [[1a2w|1a2w]], [[1h8x|1h8x]], [[3fkz|3fkz]], [[3fl1|3fl1]], [[3fl3|3fl3]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RNASE1, RNS1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 BOVIN])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Pancreatic_ribonuclease Pancreatic ribonuclease], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.5 3.1.27.5] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fl0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fl0 OCA], [https://pdbe.org/3fl0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fl0 RCSB], [https://www.ebi.ac.uk/pdbsum/3fl0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fl0 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fl0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fl0 OCA], [https://pdbe.org/3fl0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fl0 RCSB], [https://www.ebi.ac.uk/pdbsum/3fl0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fl0 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/RNAS1_BOVIN RNAS1_BOVIN]] Endonuclease that catalyzes the cleavage of RNA on the 3' side of pyrimidine nucleotides. Acts on single stranded and double stranded RNA.<ref>PMID:7479688</ref>
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[https://www.uniprot.org/uniprot/RNAS1_BOVIN RNAS1_BOVIN] Endonuclease that catalyzes the cleavage of RNA on the 3' side of pyrimidine nucleotides. Acts on single stranded and double stranded RNA.<ref>PMID:7479688</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bovin]]
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[[Category: Bos taurus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Pancreatic ribonuclease]]
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[[Category: Ercole C]]
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[[Category: Ercole, C]]
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[[Category: Mattia CA]]
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[[Category: Krauss, I Russo]]
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[[Category: Merlino A]]
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[[Category: Mattia, C A]]
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[[Category: Perillo M]]
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[[Category: Merlino, A]]
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[[Category: Picone D]]
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[[Category: Perillo, M]]
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[[Category: Russo Krauss I]]
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[[Category: Picone, D]]
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[[Category: Sica F]]
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[[Category: Sica, F]]
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[[Category: Vergara A]]
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[[Category: Vergara, A]]
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[[Category: 3d-domain swapping]]
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[[Category: Antitumor activity]]
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[[Category: Bovine seminal ribonuclease]]
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[[Category: Endonuclease]]
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[[Category: Glycation]]
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[[Category: Glycoprotein]]
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[[Category: Hydrolase]]
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[[Category: Non-covalent dimer]]
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[[Category: Nuclease]]
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[[Category: Protein mutations and evolution]]
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[[Category: Quaternary structure flexibility]]
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[[Category: Secreted]]
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Current revision

X-ray structure of the non covalent swapped form of the Q28L/K31C/S32C mutant of bovine pancreatic ribonuclease in complex with 2'-DEOXYCYTIDINE-2'-DEOXYGUANOSINE-3',5'-MONOPHOSPHATE

PDB ID 3fl0

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