3i9j

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<StructureSection load='3i9j' size='340' side='right'caption='[[3i9j]], [[Resolution|resolution]] 2.18&Aring;' scene=''>
<StructureSection load='3i9j' size='340' side='right'caption='[[3i9j]], [[Resolution|resolution]] 2.18&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3i9j]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aplca Aplca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I9J OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3I9J FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3i9j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aplysia_californica Aplysia californica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I9J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I9J FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AVV:[(2R,3S,4R,5R)-5-(6-AMINO-2-FLUORO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+[(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>AVV</scene>, <scene name='pdbligand=NCA:NICOTINAMIDE'>NCA</scene>, <scene name='pdbligand=NFD:NICOTINAMIDE+2-FLUORO-ADENINE+DINUCLEOTIDE'>NFD</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.18&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3i9k|3i9k]], [[3i9l|3i9l]], [[3i9m|3i9m]], [[3i9n|3i9n]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AVV:[(2R,3S,4R,5R)-5-(6-AMINO-2-FLUORO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+[(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>AVV</scene>, <scene name='pdbligand=NCA:NICOTINAMIDE'>NCA</scene>, <scene name='pdbligand=NFD:NICOTINAMIDE+2-FLUORO-ADENINE+DINUCLEOTIDE'>NFD</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/NAD(+)_nucleosidase NAD(+) nucleosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.5 3.2.2.5] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i9j OCA], [https://pdbe.org/3i9j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i9j RCSB], [https://www.ebi.ac.uk/pdbsum/3i9j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i9j ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3i9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i9j OCA], [http://pdbe.org/3i9j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3i9j RCSB], [http://www.ebi.ac.uk/pdbsum/3i9j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3i9j ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/NADA_APLCA NADA_APLCA]] Synthesizes the second messagers cyclic ADP-ribose and nicotinate-adenine dinucleotide phosphate, the former a second messenger for calcium mobilization from endoplasmic reticulum. Also has cADPr hydrolase activity.<ref>PMID:11829748</ref>
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[https://www.uniprot.org/uniprot/NADA_APLCA NADA_APLCA] Synthesizes the second messagers cyclic ADP-ribose and nicotinate-adenine dinucleotide phosphate, the former a second messenger for calcium mobilization from endoplasmic reticulum. Also has cADPr hydrolase activity.<ref>PMID:11829748</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aplca]]
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[[Category: Aplysia californica]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Graeff, R]]
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[[Category: Graeff R]]
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[[Category: Hao, Q]]
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[[Category: Hao Q]]
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[[Category: Jiang, H]]
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[[Category: Jiang H]]
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[[Category: Kriksunov, I A]]
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[[Category: Kriksunov IA]]
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[[Category: Lee, H C]]
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[[Category: Lee HC]]
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[[Category: Lin, H]]
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[[Category: Lin H]]
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[[Category: Liu, Q]]
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[[Category: Liu Q]]
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[[Category: Oppenheimer, N]]
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[[Category: Oppenheimer N]]
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[[Category: Potter, B V.L]]
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[[Category: Potter BVL]]
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[[Category: Zhang, B]]
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[[Category: Zhang B]]
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[[Category: Adp-ribosyl cyclase]]
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[[Category: Disulfide bond]]
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[[Category: Enzyme-analog-nicotinamide complex]]
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[[Category: Fertilization]]
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[[Category: Homodimer]]
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[[Category: Hydrolase]]
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[[Category: Nad]]
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Revision as of 15:56, 1 November 2023

Crystal structure of ADP ribosyl cyclase complexed with a substrate analog and a product nicotinamide

PDB ID 3i9j

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