3p50

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:02, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3p50' size='340' side='right'caption='[[3p50]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
<StructureSection load='3p50' size='340' side='right'caption='[[3p50]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3p50]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Glovo Glovo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3P50 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3p50]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3P50 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LMT:DODECYL-BETA-D-MALTOSIDE'>LMT</scene>, <scene name='pdbligand=PFL:2,6-BIS(1-METHYLETHYL)PHENOL'>PFL</scene>, <scene name='pdbligand=PLC:DIUNDECYL+PHOSPHATIDYL+CHOLINE'>PLC</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3p4w|3p4w]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LMT:DODECYL-BETA-D-MALTOSIDE'>LMT</scene>, <scene name='pdbligand=PFL:2,6-BIS(1-METHYLETHYL)PHENOL'>PFL</scene>, <scene name='pdbligand=PLC:DIUNDECYL+PHOSPHATIDYL+CHOLINE'>PLC</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glr4197 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=33072 GLOVO])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3p50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p50 OCA], [https://pdbe.org/3p50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3p50 RCSB], [https://www.ebi.ac.uk/pdbsum/3p50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3p50 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3p50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p50 OCA], [https://pdbe.org/3p50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3p50 RCSB], [https://www.ebi.ac.uk/pdbsum/3p50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3p50 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/GLIC_GLOVI GLIC_GLOVI]] Cationic channel with similar permeabilities for Na(+) and K(+), that is activated by an increase of the proton concentration on the extracellular side. Displays no permeability for chloride ions. Shows slow kinetics of activation, no desensitization and a single channel conductance of 8 pS. Might contribute to adaptation to external pH change.<ref>PMID:17167423</ref>
+
[https://www.uniprot.org/uniprot/GLIC_GLOVI GLIC_GLOVI] Cationic channel with similar permeabilities for Na(+) and K(+), that is activated by an increase of the proton concentration on the extracellular side. Displays no permeability for chloride ions. Shows slow kinetics of activation, no desensitization and a single channel conductance of 8 pS. Might contribute to adaptation to external pH change.<ref>PMID:17167423</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Glovo]]
+
[[Category: Gloeobacter violaceus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Baaden, M]]
+
[[Category: Baaden M]]
-
[[Category: Changeux, J P]]
+
[[Category: Changeux JP]]
-
[[Category: Corringer, P J]]
+
[[Category: Corringer PJ]]
-
[[Category: Delarue, M]]
+
[[Category: Delarue M]]
-
[[Category: Dufresne, V]]
+
[[Category: Dufresne V]]
-
[[Category: Nury, H]]
+
[[Category: Nury H]]
-
[[Category: Renterghem, C Van]]
+
[[Category: Sonner JM]]
-
[[Category: Sonner, J M]]
+
[[Category: Tran A]]
-
[[Category: Tran, A]]
+
[[Category: Van Renterghem C]]
-
[[Category: Weng, Y]]
+
[[Category: Weng Y]]
-
[[Category: Ligand-gated ion channel]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Transport protein]]
+

Current revision

Structure of propofol bound to a pentameric ligand-gated ion channel, GLIC

PDB ID 3p50

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools