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3q9t

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Current revision (17:11, 1 November 2023) (edit) (undo)
 
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<StructureSection load='3q9t' size='340' side='right'caption='[[3q9t]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
<StructureSection load='3q9t' size='340' side='right'caption='[[3q9t]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3q9t]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspor Aspor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q9T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3Q9T FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3q9t]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_oryzae_RIB40 Aspergillus oryzae RIB40]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q9T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3Q9T FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FAY:[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl+(2R,3S,4S)-5-(8-formyl-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)-2,3,4-trihydroxypentyl+dihydrogen+diphosphate'>FAY</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AO090012000349 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=510516 ASPOR])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FAY:[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl+(2R,3S,4S)-5-(8-formyl-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)-2,3,4-trihydroxypentyl+dihydrogen+diphosphate'>FAY</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3q9t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q9t OCA], [https://pdbe.org/3q9t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3q9t RCSB], [https://www.ebi.ac.uk/pdbsum/3q9t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3q9t ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3q9t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q9t OCA], [https://pdbe.org/3q9t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3q9t RCSB], [https://www.ebi.ac.uk/pdbsum/3q9t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3q9t ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q2UD26_ASPOR Q2UD26_ASPOR]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aspor]]
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[[Category: Aspergillus oryzae RIB40]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Doubayashi, D]]
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[[Category: Doubayashi D]]
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[[Category: Maeda, Y]]
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[[Category: Maeda Y]]
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[[Category: Mikami, B]]
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[[Category: Mikami B]]
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[[Category: Nagaosa, Y]]
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[[Category: Nagaosa Y]]
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[[Category: Oki, M]]
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[[Category: Oki M]]
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[[Category: Ootake, T]]
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[[Category: Ootake T]]
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[[Category: Sakurai, A]]
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[[Category: Sakurai A]]
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[[Category: Tokunaga, Y]]
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[[Category: Tokunaga Y]]
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[[Category: Uchida, H]]
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[[Category: Uchida H]]
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[[Category: 8-formyl-fad]]
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[[Category: Formate oxidase]]
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[[Category: Glucose-methanol-choline oxidoreductase family]]
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[[Category: Oxidoreductase]]
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Current revision

Crystal structure analysis of formate oxidase

PDB ID 3q9t

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OCA

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