3rk8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:17, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3rk8' size='340' side='right'caption='[[3rk8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3rk8' size='340' side='right'caption='[[3rk8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3rk8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acib2 Acib2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RK8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RK8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3rk8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii_ATCC_19606_=_CIP_70.34_=_JCM_6841 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RK8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RK8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3pud|3pud]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dhdps, HMPREF0010_03414 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=575584 ACIB2])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rk8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rk8 OCA], [https://pdbe.org/3rk8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rk8 RCSB], [https://www.ebi.ac.uk/pdbsum/3rk8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rk8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rk8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rk8 OCA], [https://pdbe.org/3rk8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rk8 RCSB], [https://www.ebi.ac.uk/pdbsum/3rk8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rk8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/D0CFC3_ACIBA D0CFC3_ACIBA]] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA) (By similarity).[SAAS:SAAS020625_004_011311][HAMAP-Rule:MF_00418]
+
[https://www.uniprot.org/uniprot/D0CFC3_ACIB2 D0CFC3_ACIB2] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[ARBA:ARBA00003294][HAMAP-Rule:MF_00418]
==See Also==
==See Also==
Line 17: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 4-hydroxy-tetrahydrodipicolinate synthase]]
+
[[Category: Acinetobacter baumannii ATCC 19606 = CIP 70 34 = JCM 6841]]
-
[[Category: Acib2]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Kaur, P]]
+
[[Category: Kaur P]]
-
[[Category: Kaushik, S]]
+
[[Category: Kaushik S]]
-
[[Category: Sharma, S]]
+
[[Category: Sharma S]]
-
[[Category: Singh, A]]
+
[[Category: Singh A]]
-
[[Category: Singh, T P]]
+
[[Category: Singh TP]]
-
[[Category: Sinha, M]]
+
[[Category: Sinha M]]
-
[[Category: Chloride]]
+
-
[[Category: Dhdp]]
+
-
[[Category: Lyase]]
+
-
[[Category: Lysine biosynthesis]]
+
-
[[Category: Pyruvate]]
+
-
[[Category: Tim barrel]]
+

Current revision

Crystal structure of the chloride inhibited dihydrodipicolinate synthase from Acinetobacter baumannii complexed with pyruvate at 1.8 A resolution

PDB ID 3rk8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools