3sfv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:25, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3sfv' size='340' side='right'caption='[[3sfv]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
<StructureSection load='3sfv' size='340' side='right'caption='[[3sfv]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3sfv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human] and [https://en.wikipedia.org/wiki/Legpc Legpc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SFV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SFV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3sfv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Legionella_pneumophila_str._Corby Legionella pneumophila str. Corby]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SFV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SFV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.73&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RAB1A ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), lidA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=400673 LEGPC])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sfv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sfv OCA], [https://pdbe.org/3sfv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sfv RCSB], [https://www.ebi.ac.uk/pdbsum/3sfv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sfv ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sfv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sfv OCA], [https://pdbe.org/3sfv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sfv RCSB], [https://www.ebi.ac.uk/pdbsum/3sfv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sfv ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/RAB1A_HUMAN RAB1A_HUMAN]] Probably required for transit of protein from the ER through Golgi compartment. Binds GTP and GDP and possesses intrinsic GTPase activity.
+
[https://www.uniprot.org/uniprot/RAB1A_HUMAN RAB1A_HUMAN] Probably required for transit of protein from the ER through Golgi compartment. Binds GTP and GDP and possesses intrinsic GTPase activity.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 26: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Legpc]]
+
[[Category: Legionella pneumophila str. Corby]]
-
[[Category: Gu, L]]
+
[[Category: Gu L]]
-
[[Category: Li, B]]
+
[[Category: Li B]]
-
[[Category: Lu, D]]
+
[[Category: Lu D]]
-
[[Category: Xu, S]]
+
[[Category: Xu S]]
-
[[Category: Yin, K]]
+
[[Category: Yin K]]
-
[[Category: Zhang, H]]
+
[[Category: Zhang H]]
-
[[Category: Zhu, D]]
+
[[Category: Zhu D]]
-
[[Category: Coiled-coil domain]]
+
-
[[Category: Gdp binding]]
+
-
[[Category: Lida-rab complex]]
+
-
[[Category: Protein transport-protein binding complex]]
+
-
[[Category: Type iv effector protein from legionella]]
+

Current revision

Crystal structure of the GDP-bound Rab1a S25N mutant in complex with the coiled-coil domain of LidA from Legionella pneumophila

PDB ID 3sfv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools