5m6d

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Current revision (18:27, 1 November 2023) (edit) (undo)
 
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<StructureSection load='5m6d' size='340' side='right'caption='[[5m6d]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5m6d' size='340' side='right'caption='[[5m6d]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5m6d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"diplococcus_pneumoniae"_(klein_1884)_weichselbaum_1886 "diplococcus pneumoniae" (klein 1884) weichselbaum 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M6D FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5m6d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M6D FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSU:CYSTEINE-S-SULFONIC+ACID'>CSU</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CSU:CYSTEINE-S-SULFONIC+ACID'>CSU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gapdh, gap, gapA, gapA_3, ERS003549_02320, ERS019166_02194, ERS019420_02001, ERS019499_02096, ERS020135_02122, ERS020141_02006, ERS020142_02114, ERS020143_02138, ERS020145_02042, ERS020146_02116, ERS020147_02108, ERS020151_01255, ERS020155_02130, ERS020157_02177, ERS020178_05802, ERS020520_01871, ERS020522_01677, ERS020523_02061, ERS020524_02058, ERS020526_04928, ERS020526_06565, ERS020527_02055, ERS020531_01991, ERS020539_02263, ERS020541_02011, ERS020726_03159, ERS020822_04318, ERS020831_02217, ERS020873_02164, ERS020881_02198, ERS021047_02054, ERS021354_07537, ERS021360_02109, ERS021447_07389, ERS022199_02215, ERS022232_07453, ERS096208_02293, ERS232497_02152, ERS367628_02144, ERS367811_01576, ERS394170_00349, ERS409165_02221, ERS409372_02114, ERS409444_01606, ERS455085_02183, ERS515225_02154, SpnNT_02067 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1313 "Diplococcus pneumoniae" (Klein 1884) Weichselbaum 1886])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m6d OCA], [https://pdbe.org/5m6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m6d RCSB], [https://www.ebi.ac.uk/pdbsum/5m6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m6d ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m6d OCA], [http://pdbe.org/5m6d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m6d RCSB], [http://www.ebi.ac.uk/pdbsum/5m6d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m6d ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/I6L8L9_STREE I6L8L9_STREE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Gaboriaud, C]]
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[[Category: Streptococcus pneumoniae]]
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[[Category: Guilmi, A M.Di]]
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[[Category: Di Guilmi AM]]
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[[Category: Moreau, C P]]
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[[Category: Gaboriaud C]]
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[[Category: Gapdh]]
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[[Category: Moreau CP]]
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[[Category: Host/pathogen]]
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[[Category: Oxidoreductase]]
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[[Category: Plasminogen binding]]
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Current revision

Streptococcus pneumoniae Glyceraldehyde-3-Phosphate Dehydrogenase (SpGAPDH) crystal structure

PDB ID 5m6d

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