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5mab

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Current revision (18:34, 1 November 2023) (edit) (undo)
 
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<StructureSection load='5mab' size='340' side='right'caption='[[5mab]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
<StructureSection load='5mab' size='340' side='right'caption='[[5mab]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5mab]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MAB OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5MAB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5mab]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodobacter_sp._SW2 Rhodobacter sp. SW2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MAB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MAB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.436&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5mab FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mab OCA], [http://pdbe.org/5mab PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mab RCSB], [http://www.ebi.ac.uk/pdbsum/5mab PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mab ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mab FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mab OCA], [https://pdbe.org/5mab PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mab RCSB], [https://www.ebi.ac.uk/pdbsum/5mab PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mab ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/A3DTD8_9RHOB A3DTD8_9RHOB]
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FoxE is a protein encoded by the foxEYZ operon of Rhodobacter ferrooxidans SW2 that is involved in Fe(II)-based anoxygenic photosynthesis (`photoferrotrophy'). It is thought to reside in the periplasm, where it stimulates light-dependent Fe(II) oxidation. It contains 259 residues, including two haem c-binding motifs. As no three-dimensional model is available and there is no structure with a similar sequence, crystals of FoxE were produced. They diffracted to 2.44 A resolution using synchrotron radiation at the Fe edge. The phase problem was solved by SAD using SHELXC/D/E and the experimental maps confirmed the presence of two haems per molecule.
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Crystallization and preliminary crystallographic studies of FoxE from Rhodobacter ferrooxidans SW2, an Fe(II) oxidoreductase involved in photoferrotrophy.,Pereira L, Saraiva IH, Coelho R, Newman DK, Louro RO, Frazao C Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Sep 1;68(Pt 9):1106-8., doi: 10.1107/S174430911203271X. Epub 2012 Aug 31. PMID:22949206<ref>PMID:22949206</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 5mab" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Frazao, C]]
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[[Category: Rhodobacter sp. SW2]]
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[[Category: Gomes, R O]]
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[[Category: Frazao C]]
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[[Category: Oliveira, A S]]
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[[Category: Gomes RO]]
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[[Category: Pereira, L]]
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[[Category: Oliveira AS]]
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[[Category: Saraiva, I H]]
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[[Category: Pereira L]]
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[[Category: Soares, C]]
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[[Category: Saraiva IH]]
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[[Category: Cytochrome-c]]
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[[Category: Soares C]]
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[[Category: Electron transfer]]
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[[Category: Electron transport]]
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[[Category: Photoferrotrophy]]
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Current revision

FoxE P3121 crystal structure of Rhodopseudomonas ferrooxidans SW2 putative iron oxidase

PDB ID 5mab

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