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3vk7

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Current revision (12:24, 8 November 2023) (edit) (undo)
 
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<StructureSection load='3vk7' size='340' side='right'caption='[[3vk7]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3vk7' size='340' side='right'caption='[[3vk7]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3vk7]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Apmv Apmv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VK7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VK7 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3vk7]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Acanthamoeba_polyphaga_mimivirus Acanthamoeba polyphaga mimivirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VK7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VK7 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=OHU:2-DEOXY-5-HYDROXYURIDINE+5-(DIHYDROGEN+PHOSPHATE)'>OHU</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=OHU:2-DEOXY-5-HYDROXYURIDINE+5-(DIHYDROGEN+PHOSPHATE)'>OHU</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3a46|3a46]], [[3vk8|3vk8]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MIMI_L315 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=212035 APMV])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vk7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vk7 OCA], [https://pdbe.org/3vk7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vk7 RCSB], [https://www.ebi.ac.uk/pdbsum/3vk7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vk7 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vk7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vk7 OCA], [https://pdbe.org/3vk7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vk7 RCSB], [https://www.ebi.ac.uk/pdbsum/3vk7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vk7 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/FPG_MIMIV FPG_MIMIV]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Apmv]]
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[[Category: Acanthamoeba polyphaga mimivirus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Averill, A]]
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[[Category: Averill A]]
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[[Category: Doublie, S]]
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[[Category: Doublie S]]
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[[Category: Imamura, K]]
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[[Category: Imamura K]]
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[[Category: Wallace, S S]]
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[[Category: Wallace SS]]
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[[Category: 5-hydroxyuracil]]
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[[Category: Dna binding]]
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[[Category: Dna glycosylase]]
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[[Category: Dna lesion]]
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[[Category: Hneil1 ortholog]]
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[[Category: Hydrolase-dna complex]]
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[[Category: Zincless finger]]
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Current revision

Crystal structure of DNA-glycosylase bound to DNA containing 5-Hydroxyuracil

PDB ID 3vk7

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