3vu1

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Current revision (12:37, 8 November 2023) (edit) (undo)
 
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<StructureSection load='3vu1' size='340' side='right'caption='[[3vu1]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='3vu1' size='340' side='right'caption='[[3vu1]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3vu1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VU1 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3vu1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VU1 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vu0|3vu0]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGLB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=70601 Pyrococcus horikoshii])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.99.18 2.4.99.18] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vu1 OCA], [https://pdbe.org/3vu1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vu1 RCSB], [https://www.ebi.ac.uk/pdbsum/3vu1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vu1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vu1 OCA], [https://pdbe.org/3vu1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vu1 RCSB], [https://www.ebi.ac.uk/pdbsum/3vu1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vu1 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/AGLB1_PYRHO AGLB1_PYRHO] Oligosaccharyl transferase (OST) that catalyzes the initial transfer of a defined glycan (ManNAcXyl(2)GlcAMan(2)GalNAc in Pyrococcus) from the lipid carrier dolichol-monophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation.[UniProtKB:Q8U4D2]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Pyrococcus horikoshii]]
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[[Category: Pyrococcus horikoshii OT3]]
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[[Category: Inagaki, F]]
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[[Category: Inagaki F]]
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[[Category: Kohda, D]]
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[[Category: Kohda D]]
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[[Category: Maita, N]]
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[[Category: Maita N]]
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[[Category: Matsumoto, S]]
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[[Category: Matsumoto S]]
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[[Category: Noda, N N]]
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[[Category: Noda NN]]
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[[Category: Nyirenda, J]]
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[[Category: Nyirenda J]]
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[[Category: Saitoh, T]]
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[[Category: Saitoh T]]
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[[Category: Asn-glycosylation]]
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[[Category: Glycotransferase]]
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[[Category: Membrane]]
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[[Category: Transferase]]
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Current revision

Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (PhAglB-L, O74088_PYRHO) from Pyrococcus horikoshii

PDB ID 3vu1

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