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| | <StructureSection load='3vwx' size='340' side='right'caption='[[3vwx]], [[Resolution|resolution]] 1.80Å' scene=''> | | <StructureSection load='3vwx' size='340' side='right'caption='[[3vwx]], [[Resolution|resolution]] 1.80Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[3vwx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/House_fly House fly]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VWX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VWX FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3vwx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Musca_domestica Musca domestica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VWX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VWX FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GST-6B ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7370 House fly])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glutathione_transferase Glutathione transferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.18 2.5.1.18] </span></td></tr>
| + | |
| | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vwx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vwx OCA], [https://pdbe.org/3vwx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vwx RCSB], [https://www.ebi.ac.uk/pdbsum/3vwx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vwx ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vwx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vwx OCA], [https://pdbe.org/3vwx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vwx RCSB], [https://www.ebi.ac.uk/pdbsum/3vwx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vwx ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/Q9U795_MUSDO Q9U795_MUSDO] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Glutathione transferase]] | |
| - | [[Category: House fly]] | |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Miyamoto, T]] | + | [[Category: Musca domestica]] |
| - | [[Category: Nakamura, C]] | + | [[Category: Miyamoto T]] |
| - | [[Category: Sue, M]] | + | [[Category: Nakamura C]] |
| - | [[Category: Yajima, S]] | + | [[Category: Sue M]] |
| - | [[Category: Glutathione binding]]
| + | [[Category: Yajima S]] |
| - | [[Category: Transferase]]
| + | |
| Structural highlights
Function
Q9U795_MUSDO
Publication Abstract from PubMed
Glutathione transferases (GSTs) play an important role in the detoxification of insecticides, and as such, they are a key contributor to enhanced resistance to insecticides. In the housefly (Musca domestica), two epsilon-class GSTs (MdGST6A and MdGST6B) that share high sequence homology have been identified, which are believed to be involved in resistance against insecticides. The structural determinants controlling the substrate specificity and enzyme activity of MdGST6s are unknown. The aim of this study was to crystallize and perform structural analysis of the GST isozyme, MdGST6B. The crystal structure of MdGST6B complexed with reduced glutathione (GSH) was determined at a resolution of 1.8A. MdGST6B was found to have a typical GST folding comprised of N-terminal and C-terminal domains. Arg113 and Phe121 on helix 4 were shown to protrude into the substrate binding pocket, and as a result, the entrance of the substrate binding pocket was narrower compared to delta- and epsilon-class GSTs from Africa malaria vector Anopheles gambiae, agGSTd1-6 and agGSTe2, respectively. This substrate pocket narrowing is partly due to the presence of a pi-helix in the middle of helix 4. Among the six residues that donate hydrogen bonds to GSH, only Arg113 was located in the C-terminal domain. Ala substitution of Arg113 did not have a significant effect on enzyme activity, suggesting that the Arg113 hydrogen bond does not play a crucial role in catalysis. On the other hand, mutation at Phe108, located just below Arg113 in the binding pocket, reduced the affinity and catalytic activity to both GSH and the electrophilic co-substrate, 1-chloro-2,4-dinitrobenzene.
Structural analysis of an epsilon-class glutathione transferase from housefly, Musca domestica.,Nakamura C, Yajima S, Miyamoto T, Sue M Biochem Biophys Res Commun. 2013 Jan 25;430(4):1206-11. doi:, 10.1016/j.bbrc.2012.12.077. Epub 2012 Dec 22. PMID:23268341[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Nakamura C, Yajima S, Miyamoto T, Sue M. Structural analysis of an epsilon-class glutathione transferase from housefly, Musca domestica. Biochem Biophys Res Commun. 2013 Jan 25;430(4):1206-11. doi:, 10.1016/j.bbrc.2012.12.077. Epub 2012 Dec 22. PMID:23268341 doi:http://dx.doi.org/10.1016/j.bbrc.2012.12.077
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