3w52

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Current revision (12:50, 8 November 2023) (edit) (undo)
 
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<StructureSection load='3w52' size='340' side='right'caption='[[3w52]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
<StructureSection load='3w52' size='340' side='right'caption='[[3w52]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3w52]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W52 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W52 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3w52]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W52 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W52 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3sng|3sng]], [[1ak0|1ak0]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ENDO2, At1g68290, T22E19.8 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Aspergillus_nuclease_S(1) Aspergillus nuclease S(1)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.30.1 3.1.30.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w52 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w52 OCA], [https://pdbe.org/3w52 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w52 RCSB], [https://www.ebi.ac.uk/pdbsum/3w52 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w52 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w52 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w52 OCA], [https://pdbe.org/3w52 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w52 RCSB], [https://www.ebi.ac.uk/pdbsum/3w52 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w52 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/ENDO2_ARATH ENDO2_ARATH]] Probable endonuclease (By similarity). Can not hydrolyze single stranded DNA and does not cleave mismatches.
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[https://www.uniprot.org/uniprot/ENDO2_ARATH ENDO2_ARATH] Probable endonuclease (By similarity). Can not hydrolyze single stranded DNA and does not cleave mismatches.
==See Also==
==See Also==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Arath]]
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[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Chou, T L]]
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[[Category: Chou TL]]
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[[Category: Ko, C Y]]
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[[Category: Ko CY]]
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[[Category: Ko, T P]]
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[[Category: Ko TP]]
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[[Category: Shaw, J F]]
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[[Category: Shaw JF]]
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[[Category: Wang, A H.J]]
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[[Category: Wang AHJ]]
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[[Category: Dna]]
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[[Category: Hydrolase]]
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[[Category: Mostly alpha-helical]]
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[[Category: Nuclease]]
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[[Category: Rna]]
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Current revision

Zinc-dependent bifunctional nuclease

PDB ID 3w52

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