This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3wrz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:24, 8 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3wrz' size='340' side='right'caption='[[3wrz]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3wrz' size='340' side='right'caption='[[3wrz]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3wrz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromohalobacter_sp._#560 Chromohalobacter sp. #560]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WRZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WRZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3wrz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromohalobacter_sp._560 Chromohalobacter sp. 560]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WRZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WRZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3wrt|3wrt]], [[3ws0|3ws0]], [[3ws1|3ws1]], [[3ws2|3ws2]], [[3ws4|3ws4]], [[3ws5|3ws5]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bla ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=169132 Chromohalobacter sp. #560])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wrz OCA], [https://pdbe.org/3wrz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wrz RCSB], [https://www.ebi.ac.uk/pdbsum/3wrz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wrz ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wrz OCA], [https://pdbe.org/3wrz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wrz RCSB], [https://www.ebi.ac.uk/pdbsum/3wrz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wrz ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q76LX5_9GAMM Q76LX5_9GAMM]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 26: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Beta-lactamase]]
+
[[Category: Chromohalobacter sp. 560]]
-
[[Category: Chromohalobacter sp. #560]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Adachi, M]]
+
[[Category: Adachi M]]
-
[[Category: Arai, S]]
+
[[Category: Arai S]]
-
[[Category: Ishibashi, M]]
+
[[Category: Ishibashi M]]
-
[[Category: Kuroki, R]]
+
[[Category: Kuroki R]]
-
[[Category: Matsumoto, F]]
+
[[Category: Matsumoto F]]
-
[[Category: Okazaki, N]]
+
[[Category: Okazaki N]]
-
[[Category: Shimizu, R]]
+
[[Category: Shimizu R]]
-
[[Category: Tamada, T]]
+
[[Category: Tamada T]]
-
[[Category: Tokunaga, H]]
+
[[Category: Tokunaga H]]
-
[[Category: Tokunaga, M]]
+
[[Category: Tokunaga M]]
-
[[Category: Yamada, M]]
+
[[Category: Yamada M]]
-
[[Category: Yonezawa, Y]]
+
[[Category: Yonezawa Y]]
-
[[Category: Cephalosporinase]]
+
-
[[Category: Hydrolase]]
+

Current revision

N288Q-N321Q mutant BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (without soaking)

PDB ID 3wrz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools