3wvi

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Current revision (13:30, 8 November 2023) (edit) (undo)
 
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<StructureSection load='3wvi' size='340' side='right'caption='[[3wvi]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
<StructureSection load='3wvi' size='340' side='right'caption='[[3wvi]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3wvi]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Haein Haein]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WVI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WVI FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3wvi]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae_Rd_KW20 Haemophilus influenzae Rd KW20] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WVI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WVI FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3wvg|3wvg]], [[3wvh|3wvh]], [[3wvk|3wvk]], [[3wvp|3wvp]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hindIIIR, HI_1393 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=71421 HAEIN])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Type_II_site-specific_deoxyribonuclease Type II site-specific deoxyribonuclease], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.21.4 3.1.21.4] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wvi OCA], [https://pdbe.org/3wvi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wvi RCSB], [https://www.ebi.ac.uk/pdbsum/3wvi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wvi ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wvi OCA], [https://pdbe.org/3wvi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wvi RCSB], [https://www.ebi.ac.uk/pdbsum/3wvi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wvi ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/T2D3_HAEIN T2D3_HAEIN]] Recognizes the double-stranded sequence AAGCTT and cleaves after A-1.
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[https://www.uniprot.org/uniprot/T2D3_HAEIN T2D3_HAEIN] Recognizes the double-stranded sequence AAGCTT and cleaves after A-1.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 3wvi" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3wvi" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Endonuclease 3D structures|Endonuclease 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Haein]]
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[[Category: Haemophilus influenzae Rd KW20]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Type II site-specific deoxyribonuclease]]
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[[Category: Synthetic construct]]
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[[Category: Kawamura, T]]
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[[Category: Kawamura T]]
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[[Category: Kobayashi, T]]
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[[Category: Kobayashi T]]
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[[Category: Watanabe, N]]
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[[Category: Watanabe N]]
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[[Category: Endonuclease]]
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[[Category: Freeze-trap]]
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[[Category: Hydrolase]]
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[[Category: Hydrolase-dna complex]]
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[[Category: Nuclease]]
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[[Category: Type iip restriction endonuclease]]
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Current revision

Time-Resolved Crystal Structure of HindIII with 40 sec soaking

PDB ID 3wvi

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