4lw2
From Proteopedia
(Difference between revisions)
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==Structural changes during cysteine desulfurase CsdA and sulfur-acceptor CsdE interactions provide insight into the trans-persulfuration== | ==Structural changes during cysteine desulfurase CsdA and sulfur-acceptor CsdE interactions provide insight into the trans-persulfuration== | ||
| - | <StructureSection load='4lw2' size='340' side='right'caption='[[4lw2]]' scene=''> | + | <StructureSection load='4lw2' size='340' side='right'caption='[[4lw2]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LW2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LW2 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4lw2]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LW2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LW2 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lw2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lw2 OCA], [https://pdbe.org/4lw2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lw2 RCSB], [https://www.ebi.ac.uk/pdbsum/4lw2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lw2 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lw2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lw2 OCA], [https://pdbe.org/4lw2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lw2 RCSB], [https://www.ebi.ac.uk/pdbsum/4lw2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lw2 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/CSDA_ECOLI CSDA_ECOLI] Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. L-cysteine sulfinic acid is the best substrate. Functions as a selenium delivery protein in the pathway for the biosynthesis of selenophosphate.<ref>PMID:10829016</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | In Escherichia coli, three cysteine desulfurases (IscS, SufS and CsdA) initiate the delivery of sulfur for various biological processes such as the biogenesis of Fe-S clusters. The sulfur generated as persulfide on a cysteine residue of cysteine desulfurases are further transferred to Fe-S scaffolds (e.g. IscU), or to intermediate cysteine-containing sulfur-acceptors (e.g. TusA, SufE, and CsdE) prior to its utilization. Herein, we report structures of CsdA, and CsdA-CsdE complex, which provide insight into the sulfur transfer mediated by the trans-persulfuration reaction. Analysis of the structures indicates that the conformational flexibility of the active cysteine loop in CsdE is essential for accepting the persulfide from the cysteine of CsdA. Additionally, CsdA and CsdE invoke a different binding mode than those of previously reported cysteine desulfurase (IscS) and sulfur-acceptors (TusA and IscU). Moreover, the conservation of interaction-mediating residues between CsdA/SufS and CsdE/SufE further suggests that the SufS-SufE interface likely resembles that of CsdA and CsdE. | ||
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| + | Structural changes during cysteine desulfurase CsdA and sulfur-acceptor CsdE interactions provide insight into the trans-persulfuration.,Kim S, Park S J Biol Chem. 2013 Aug 2. PMID:23913692<ref>PMID:23913692</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 4lw2" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Cysteine desulfurase 3D structures|Cysteine desulfurase 3D structures]] | *[[Cysteine desulfurase 3D structures|Cysteine desulfurase 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Escherichia coli K-12]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Kim S]] | [[Category: Kim S]] | ||
[[Category: Park SY]] | [[Category: Park SY]] | ||
Current revision
Structural changes during cysteine desulfurase CsdA and sulfur-acceptor CsdE interactions provide insight into the trans-persulfuration
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