5myd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:53, 8 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5myd' size='340' side='right'caption='[[5myd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='5myd' size='340' side='right'caption='[[5myd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5myd]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MYD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5MYD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5myd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_sp._HMSC068C09 Staphylococcus sp. HMSC068C09]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MYD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MYD FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUP:2-DEOXYURIDINE+5-ALPHA,BETA-IMIDO-TRIPHOSPHATE'>DUP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/dUTP_diphosphatase dUTP diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.23 3.6.1.23] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUP:2-DEOXYURIDINE+5-ALPHA,BETA-IMIDO-TRIPHOSPHATE'>DUP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5myd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5myd OCA], [http://pdbe.org/5myd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5myd RCSB], [http://www.ebi.ac.uk/pdbsum/5myd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5myd ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5myd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5myd OCA], [https://pdbe.org/5myd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5myd RCSB], [https://www.ebi.ac.uk/pdbsum/5myd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5myd ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A2D0TC86_9STAP A0A2D0TC86_9STAP]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: DUTP diphosphatase]]
+
[[Category: Staphylococcus sp. HMSC068C09]]
-
[[Category: Alite, C]]
+
[[Category: Alite C]]
-
[[Category: Bowring, J]]
+
[[Category: Bowring J]]
-
[[Category: Ciges-Tomas, J R]]
+
[[Category: Ciges-Tomas JR]]
-
[[Category: Donderis, J]]
+
[[Category: Donderis J]]
-
[[Category: Maiques, E]]
+
[[Category: Maiques E]]
-
[[Category: Marina, A]]
+
[[Category: Marina A]]
-
[[Category: Mehmedov, I]]
+
[[Category: Mehmedov I]]
-
[[Category: Penades, J R]]
+
[[Category: Penades JR]]
-
[[Category: Tormo-Mas, M A]]
+
[[Category: Tormo-Mas MA]]
-
[[Category: Dutpase]]
+
-
[[Category: Gene transfer]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Mobile genetic element]]
+
-
[[Category: Pathogenicity island]]
+
-
[[Category: Sapi]]
+
-
[[Category: Signalling]]
+
-
[[Category: Staphylococcus aureus]]
+

Current revision

Convergent evolution involving dimeric and trimeric dUTPases in signalling.

PDB ID 5myd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools