Histidine-tyrosine protein crosslinks

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Covalent bonds between histidine and tyrosine form in some c-type cytochromes<ref name="tsukihara2003">PMID: 14673090</ref><ref name="tsukihara-missed">Although His-Tyr bonds are present in [[1v54]] and [[1v55]] published by Tsukihara ''et al.'', no mention of them is made in their 2003 paper.</ref><ref name="buse">PMID: 10338009</ref><ref name="kaila">PMID: 19388139</ref><ref name="ehudin">PMID: 31150209</ref> and catalases<ref name="bravo1997">PMID: 9144772</ref><ref name="bravo1999">Bravo J, Mate MJ, Schneider T, Switala J, Wilson K, Loewen PC, Fita I. Structure of catalase HPII from Escherichia coli at 1.9 A resolution. Proteins. 1999 Feb 1;34(2):155-66. doi:[https://tinyurl.com/mnhkmpse 10.1002/(sici)1097-0134(19990201)34:2<155::aid-prot1>3.0.co;2-p.] PMID:[https://pubmed.ncbi.nlm.nih.gov/10022351/ 10022351] </ref>, making crosslinks between polypeptide chains near the catalytic sites.
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Covalent bonds between histidine and tyrosine form in some a-type cytochrome C oxidases<ref name="tsukihara2003">PMID: 14673090</ref><ref name="tsukihara-missed">Although His-Tyr bonds are present in [[1v54]] and [[1v55]] published by Tsukihara ''et al.'', no mention of them is made in their 2003 paper.</ref><ref name="buse">PMID: 10338009</ref><ref name="kaila">PMID: 19388139</ref><ref name="ehudin">PMID: 31150209</ref> and catalases<ref name="bravo1997">PMID: 9144772</ref><ref name="bravo1999">Bravo J, Mate MJ, Schneider T, Switala J, Wilson K, Loewen PC, Fita I. Structure of catalase HPII from Escherichia coli at 1.9 A resolution. Proteins. 1999 Feb 1;34(2):155-66. doi:[https://tinyurl.com/mnhkmpse 10.1002/(sici)1097-0134(19990201)34:2<155::aid-prot1>3.0.co;2-p.] PMID:[https://pubmed.ncbi.nlm.nih.gov/10022351/ 10022351] </ref>, making crosslinks between polypeptide chains near the catalytic sites.
==Examples==
==Examples==
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==Other Protein Crosslinks==
==Other Protein Crosslinks==
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In addition to the thioester bonds discussed above, other [[Protein crosslinks|covalent cross-links between polypeptide chains]] include:
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In addition to the bonds discussed above, other [[Protein crosslinks|covalent cross-links between polypeptide chains]] include:
*[[Disulfide bond]]s
*[[Disulfide bond]]s
*[[Isopeptide bond]]s
*[[Isopeptide bond]]s

Revision as of 17:14, 9 November 2023

Covalent bonds between histidine and tyrosine form in some a-type cytochrome C oxidases[1][2][3][4][5] and catalases[6][7], making crosslinks between polypeptide chains near the catalytic sites.

Examples

  • 1gge 1999: E. coli catalase HPII.
  • 1v54 2003: Bovine heart cytochrome c oxidase.
  • 2yev 2012: Thermus thermophilus cytochrome caa3 oxidase.
  • 7coh 2021: Bovine heart cytochrome c oxidase.

Other Protein Crosslinks

In addition to the bonds discussed above, other covalent cross-links between polypeptide chains include:

References and Notes

  1. ↑ Tsukihara T, Shimokata K, Katayama Y, Shimada H, Muramoto K, Aoyama H, Mochizuki M, Shinzawa-Itoh K, Yamashita E, Yao M, Ishimura Y, Yoshikawa S. The low-spin heme of cytochrome c oxidase as the driving element of the proton-pumping process. Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15304-9. Epub 2003 Dec 12. PMID:14673090 doi:10.1073/pnas.2635097100
  2. ↑ Although His-Tyr bonds are present in 1v54 and 1v55 published by Tsukihara et al., no mention of them is made in their 2003 paper.
  3. ↑ Buse G, Soulimane T, Dewor M, Meyer HE, Bluggel M. Evidence for a copper-coordinated histidine-tyrosine cross-link in the active site of cytochrome oxidase. Protein Sci. 1999 May;8(5):985-90. PMID:10338009 doi:http://dx.doi.org/10.1110/ps.8.5.985
  4. ↑ Kaila VR, Johansson MP, Sundholm D, Laakkonen L, Wistrom M. The chemistry of the CuB site in cytochrome c oxidase and the importance of its unique His-Tyr bond. Biochim Biophys Acta. 2009 Apr;1787(4):221-33. doi: 10.1016/j.bbabio.2009.01.002. PMID:19388139 doi:http://dx.doi.org/10.1016/j.bbabio.2009.01.002
  5. ↑ Ehudin MA, Senft L, Franke A, Ivanovic-Burmazovic I, Karlin KD. Formation and Reactivity of New Isoporphyrins: Implications for Understanding the Tyr-His Cross-Link Cofactor Biogenesis in Cytochrome c Oxidase. J Am Chem Soc. 2019 Jul 10;141(27):10632-10643. doi: 10.1021/jacs.9b01791. Epub, 2019 Jun 26. PMID:31150209 doi:http://dx.doi.org/10.1021/jacs.9b01791
  6. ↑ Bravo J, Fita I, Ferrer JC, Ens W, Hillar A, Switala J, Loewen PC. Identification of a novel bond between a histidine and the essential tyrosine in catalase HPII of Escherichia coli. Protein Sci. 1997 May;6(5):1016-23. PMID:9144772 doi:http://dx.doi.org/10.1002/pro.5560060507
  7. ↑ Bravo J, Mate MJ, Schneider T, Switala J, Wilson K, Loewen PC, Fita I. Structure of catalase HPII from Escherichia coli at 1.9 A resolution. Proteins. 1999 Feb 1;34(2):155-66. doi:10.1002/(sici)1097-0134(19990201)34:2<155::aid-prot1>3.0.co;2-p. PMID:10022351

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