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6l07

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Current revision (10:28, 15 November 2023) (edit) (undo)
 
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<StructureSection load='6l07' size='340' side='right'caption='[[6l07]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
<StructureSection load='6l07' size='340' side='right'caption='[[6l07]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6l07]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6L07 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6l07]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6L07 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PEE:1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE'>PEE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.6&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PPI:PROPANOIC+ACID'>PPI</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PEE:1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE'>PEE</scene>, <scene name='pdbligand=PPI:PROPANOIC+ACID'>PPI</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phosphatidylserine_decarboxylase Phosphatidylserine decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.65 4.1.1.65] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6l07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l07 OCA], [https://pdbe.org/6l07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6l07 RCSB], [https://www.ebi.ac.uk/pdbsum/6l07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6l07 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6l07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l07 OCA], [https://pdbe.org/6l07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6l07 RCSB], [https://www.ebi.ac.uk/pdbsum/6l07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6l07 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/A0A446DLT6_ECOLX A0A446DLT6_ECOLX]] Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).[HAMAP-Rule:MF_00662][SAAS:SAAS00970414]
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[https://www.uniprot.org/uniprot/PSD_ECOLI PSD_ECOLI] Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Only decarboxylates the lipid-linked form of the serine moiety, and not serine alone or derivatives like phosphoserine or glycerophosphoserine.[HAMAP-Rule:MF_00662]<ref>PMID:4598120</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Ecobd]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Phosphatidylserine decarboxylase]]
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[[Category: Watanabe S]]
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[[Category: Watanabe, S]]
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[[Category: Watanabe Y]]
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[[Category: Watanabe, Y]]
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[[Category: Lyase]]
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[[Category: Membrane]]
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[[Category: Phosphatidylethanolamine]]
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[[Category: Phosphatidylserine]]
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Current revision

Crystal structure of Escherichia coli phosphatidylserine decarboxylase (PE-bound form)

PDB ID 6l07

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