5ndh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:49, 15 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5ndh' size='340' side='right'caption='[[5ndh]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
<StructureSection load='5ndh' size='340' side='right'caption='[[5ndh]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ndh]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NDH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5NDH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ndh]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NDH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NDH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.81&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CBV:5-BROMOCYTIDINE+5-(DIHYDROGEN+PHOSPHATE)'>CBV</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CBV:5-BROMOCYTIDINE+5-(DIHYDROGEN+PHOSPHATE)'>CBV</scene>, <scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5ndh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ndh OCA], [http://pdbe.org/5ndh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ndh RCSB], [http://www.ebi.ac.uk/pdbsum/5ndh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ndh ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ndh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ndh OCA], [https://pdbe.org/5ndh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ndh RCSB], [https://www.ebi.ac.uk/pdbsum/5ndh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ndh ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 24: Line 24:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Gloeobacter violaceus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Huang, L]]
+
[[Category: Huang L]]
-
[[Category: Lilley, D M.J]]
+
[[Category: Lilley DMJ]]
-
[[Category: Wang, J]]
+
[[Category: Wang J]]
-
[[Category: Dimer]]
+
-
[[Category: Guanidine ii riboswitch]]
+
-
[[Category: Rna]]
+
-
[[Category: Stem-loop]]
+
-
[[Category: Tetra loop]]
+

Current revision

The structure of the G. violaceus guanidine II riboswitch P2 stem-loop

PDB ID 5ndh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools