5nfn

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Current revision (12:54, 15 November 2023) (edit) (undo)
 
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<StructureSection load='5nfn' size='340' side='right'caption='[[5nfn]], [[Resolution|resolution]] 2.98&Aring;' scene=''>
<StructureSection load='5nfn' size='340' side='right'caption='[[5nfn]], [[Resolution|resolution]] 2.98&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5nfn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NFN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NFN FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5nfn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NFN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NFN FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.982&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5fno|5fno]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">JMJD7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5nfn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nfn OCA], [https://pdbe.org/5nfn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nfn RCSB], [https://www.ebi.ac.uk/pdbsum/5nfn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nfn ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nfn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nfn OCA], [http://pdbe.org/5nfn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nfn RCSB], [http://www.ebi.ac.uk/pdbsum/5nfn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nfn ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/JMJD7_HUMAN JMJD7_HUMAN]
==See Also==
==See Also==
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*[[Jumonji domain-containing protein|Jumonji domain-containing protein]]
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*[[Jumonji domain-containing protein 3D structures|Jumonji domain-containing protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Chowdhury, R]]
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[[Category: Chowdhury R]]
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[[Category: Markolovic, S]]
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[[Category: Markolovic S]]
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[[Category: Schofield, C J]]
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[[Category: Schofield CJ]]
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[[Category: 2-oxoglutarate]]
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[[Category: Cancer]]
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[[Category: Development]]
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[[Category: Developmentally regulated gtp binding protein]]
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[[Category: Dimerisation]]
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[[Category: Dioxygenase]]
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[[Category: Drg1]]
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[[Category: Drg2]]
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[[Category: Dsbh]]
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[[Category: Facial triad]]
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[[Category: Helix-loop-helix-beta]]
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[[Category: Hydroxylation]]
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[[Category: Hypoxia]]
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[[Category: Iron]]
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[[Category: Jmjc]]
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[[Category: Jmjc demethylase]]
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[[Category: Jmjc domain]]
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[[Category: Jmjc domain-containing protein 7]]
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[[Category: Jmjc hydroxylase]]
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[[Category: Jmjd7]]
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[[Category: Kdm]]
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[[Category: Lysyl hydroxylation]]
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[[Category: Metal-binding]]
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[[Category: Non-heme]]
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[[Category: Nucleic acid-binding]]
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[[Category: Oxidoreductase]]
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[[Category: Oxygenase]]
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[[Category: Post-translational modification]]
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[[Category: Ptm]]
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[[Category: Ribosome biogenesis]]
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[[Category: Trafac gtpase]]
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[[Category: Translation]]
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[[Category: Translation factor]]
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Current revision

JMJD7 IN COMPLEX WITH MN AND 2OG IN THE H32 FORM

PDB ID 5nfn

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