|
|
| Line 3: |
Line 3: |
| | <StructureSection load='5wvh' size='340' side='right'caption='[[5wvh]], [[Resolution|resolution]] 2.80Å' scene=''> | | <StructureSection load='5wvh' size='340' side='right'caption='[[5wvh]], [[Resolution|resolution]] 2.80Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[5wvh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Asian_corn_borer Asian corn borer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WVH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5WVH FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5wvh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ostrinia_furnacalis Ostrinia furnacalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WVH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5WVH FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.801Å</td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5wv9|5wv9]], [[5wv8|5wv8]], [[5wvb|5wvb]], [[5wvf|5wvf]], [[5wvg|5wvg]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PRD_900017:triacetyl-beta-chitotriose'>PRD_900017</scene></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Chitinase Chitinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.14 3.2.1.14] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5wvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wvh OCA], [https://pdbe.org/5wvh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5wvh RCSB], [https://www.ebi.ac.uk/pdbsum/5wvh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5wvh ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5wvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wvh OCA], [http://pdbe.org/5wvh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5wvh RCSB], [http://www.ebi.ac.uk/pdbsum/5wvh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5wvh ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/U5LUV7_OSTFU U5LUV7_OSTFU] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
| Line 25: |
Line 26: |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Asian corn borer]] | |
| - | [[Category: Chitinase]] | |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Liu, T]] | + | [[Category: Ostrinia furnacalis]] |
| - | [[Category: Yang, Q]] | + | [[Category: Liu T]] |
| - | [[Category: Zhou, Y]] | + | [[Category: Yang Q]] |
| - | [[Category: Chitin metabolism]] | + | [[Category: Zhou Y]] |
| - | [[Category: Hydrolase]]
| + | |
| - | [[Category: Ostrinia furnacali]]
| + | |
| - | [[Category: Three-dimensional structure]]
| + | |
| Structural highlights
Function
U5LUV7_OSTFU
Publication Abstract from PubMed
The glycoside hydrolase family 18 chitinases degrade or alter chitin. Multiple catalytic domains in a glycoside hydrolase family 18 chitinase function synergistically during chitin degradation. Here, an insect group III chitinase from the agricultural pest Ostrinia furnacalis (OfChtIII) is revealed to be an arthropod-conserved chitinase that contains two nonsynergistic GH18 domains according to its catalytic properties. Both GH18 domains are active towards single-chained chitin substrates, but are inactive towards insoluble chitin substrates. The crystal structures of each unbound GH18 domain, as well as of GH18 domains complexed with hexa-N-acetyl-chitohexaose or penta-N-acetyl-chitopentaose, suggest that the two GH18 domains possess endo-specific activities. Physiological data indicated that the developmental stage-dependent gene-expression pattern of OfChtIII was the same as that of the chitin synthase OfChsA but significantly different from that of the chitinase OfChtI, which is indispensable for cuticular chitin degradation. Additionally, immunological staining indicated that OfChtIII was co-localized with OfChsA. Thus, OfChtIII is most likely to be involved in the chitin-synthesis pathway.
The deduced role of a chitinase containing two nonsynergistic catalytic domains.,Liu T, Zhu W, Wang J, Zhou Y, Duan Y, Qu M, Yang Q Acta Crystallogr D Struct Biol. 2018 Jan 1;74(Pt 1):30-40. doi:, 10.1107/S2059798317018289. Epub 2018 Jan 1. PMID:29372897[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Liu T, Zhu W, Wang J, Zhou Y, Duan Y, Qu M, Yang Q. The deduced role of a chitinase containing two nonsynergistic catalytic domains. Acta Crystallogr D Struct Biol. 2018 Jan 1;74(Pt 1):30-40. doi:, 10.1107/S2059798317018289. Epub 2018 Jan 1. PMID:29372897 doi:http://dx.doi.org/10.1107/S2059798317018289
|
